Data search


search
Exact
Search

Results for MligTC455_47270

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47270 139 2.90 Mlig455_057576

Neo: Irradiation

Age: Down-Up-Up

Mlig455_057576 {REF} {Length: 2184} {RNA1310_33879} {RNA815_33583}

Cumulative graph for MligTC455_47270

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.774 2.178 0.62106 1.00000
RegionR2 1.51 2.178 0.12043 0.42948
RegionR3 -1.382 2.178 0.05239 0.40054
RegionR4 -2.081 2.178 0.04047 0.16693
RegionR5 0.073 2.178 0.99540 1.00000
RegionR6 -0.068 2.178 0.92216 1.00000
RegionR7 0.85 2.178 0.37346 1.00000
RegionR8 1.873 2.178 0.09065 0.56911

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.043 2.178 0.04812 0.69012
RegenerationR2 1.034 2.178 0.28937 0.73232
RegenerationR3 2.351 2.178 0.01966 0.25648
RegenerationR4 2.159 2.178 0.02764 0.26676
RegenerationR5 1.429 2.178 0.03901 0.32564
RegenerationR6 -0.028 2.178 0.99940 1.00000
RegenerationBL 3.269 2.178 0.00114 0.02494
RegenerationTP 0.511 2.178 0.61878 0.97171


Genes with expression patterns similar to MligTC455_47270

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47270 139 2.9 Mlig455_057576

Neo: Irradiation

Age: Down-Up-Up

4 1.000 1.000 - - 1.000 1.000 Mlig455_057576 {REF} {Length: 2184} {RNA1310_33879} {RNA815_33583}
2. MligTC455_33296 570 11.88 Mlig455_034979, Mlig455_053705

Neo: -

Age: -

2.543 0.810 0.764 - - - 0.969

Mlig455_034979 {REF} {Length: 2544} {RNA1509_22376} {RNA1310_23542, RNA1509_22376} {RNA1509_22376, RNA815_7831}

Mlig455_053705 {REF} {Length: 3107} {RNA1509_22376} {RNA1310_23542} {RNA815_7831}
3. MligTC455_32586 97 2.02 Mlig455_052753

Neo: Irradiation

Age: -

Region-enriched R5: 2.108/0.03498

1.767 0.797 - - - - 0.970 Mlig455_052753 {REF} {Length: 1463} {TRANSSPLICED} {RNA1509_48403} {RNA1310_44079, RNA1509_48403} {RNA1509_48403, RNA815_21852}
4. MligTC455_42161 258 5.38 Mlig455_050754

Neo: -

Age: logFC(26M/2M)=0.277

Region-enriched R5: 2.377/0.00128

MLEC 1.734 0.954 - - - - 0.780 Mlig455_050754 {REF} {Length: 2949} {Pfam: Malectin domain [PF11721.10, score=42.0]} {Human: ENSG00000110917, MLEC, malectin, [Score=113, Expect=2e-30]} {Mouse: ENSMUSG00000048578, Mlec, malectin, [Score=111, Expect=6e-30]} {Dmel: FBgn0032916, CG9257, [Score=127, Expect=1e-35]} {Celegans: WBGene00018423, F44E2.10, [Score=58.9, Expect=1e-10]} {Smed: dd_Smed_v6_1880_0_1, dd_Smed_v6_1880_0_1, [Score=162, Expect=2e-49]} {RNA1509_59345} {RNA1310_35371} {RNA815_14442}
5. MligTC455_23994 93 1.95 Mlig455_048700

Neo: -

Age: -

KDM6A 0.983 - - - - - 0.983 Mlig455_048700 {REF} {Length: 4708} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=104.2]; WD domain, G-beta repeat [PF00400.34, score=45.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=19.3]} {Human: ENSG00000147050, KDM6A, lysine demethylase 6A, [RH, Score=586, Expect=0.0]; ENSG00000183878, UTY, ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, [RH, Score=577, Expect=0.0]; ENSG00000132510, KDM6B, lysine demethylase 6B, [RH, Score=560, Expect=4e-175]} {Mouse: ENSMUSG00000037369, Kdm6a, lysine (K)-specific demethylase 6A, [RH, Score=589, Expect=0.0]; ENSMUSG00000018476, Kdm6b, KDM1 lysine (K)-specific demethylase 6B, [RH, Score=560, Expect=9e-176]} {Dmel: FBgn0260749, Utx, Utx histone demethylase, [Score=590, Expect=0.0]} {Celegans: WBGene00017046, utx-1, UTX (Ubiquitously transcribed TPR on X) homolog, [RH, Score=422, Expect=9e-129]} {Smed: dd_Smed_v6_5837_0_1, dd_Smed_v6_5837_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_48790} {RNA1310_10269.1} {RNA815_1846}
6. MligTC455_10522 86 1.8 Mlig455_047713

Neo: -

Age: -

0.977 - - - - - 0.977 Mlig455_047713 {REF} {Length: 2067} {RNA1509_36146} {RNA1310_33642} {RNA815_14202}
7. MligTC455_15471 310 6.45 Mlig455_022527

Neo: Irradiation

Age: logFC(26M/2M)=0.502

Region-enriched R5: 3.024/0.00001

CHEK1 0.977 - - - - - 0.977 Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053}
8. MligTC455_13489 99 2.06 Mlig455_052411

Neo: Irradiation

Age: -

Region-enriched R5: 2.712/0.02804

0.974 - - - - - 0.974 Mlig455_052411 {REF} {Length: 1290} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=30.9]} {RNA1509_40924} {RNA1310_26717} {RNA815_11954.1}
9. MligTC455_51459 181 3.76 Mlig455_010077, Mlig455_063246

Neo: -

Age: Down-Up-Up

0.967 - - - - - 0.967

Mlig455_010077 {REF} {Length: 657} {Pfam: Tyrosine hydroxylase N terminal [PF12549.10, score=42.7]} {RNA1310_62596} {RNA815_36555}

Mlig455_063246 {REF} {Length: 828} {Pfam: Tyrosine hydroxylase N terminal [PF12549.10, score=52.3]; P-loop ATPase protein family [PF03668.17, score=21.6]} {RNA1310_62596} {RNA815_36555}
10. MligTC455_18174 383 7.98 Mlig455_064745

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.035/0.02461

LMO7 0.965 - - - - - 0.965 Mlig455_064745 {REF} {Length: 5455} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=47.7]; LIM domain [PF00412.24, score=27.8]; CAMSAP CH domain [PF11971.10, score=20.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.2, Expect=8e-19]} {Dmel: FBgn0263346, CG43427, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00017904, lim-8, LIM domain family, [RH, Score=116, Expect=4e-26]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=80.5, Expect=3e-15]} {RNA1509_28988, RNA1509_58786} {RNA1310_10382, RNA1509_28988, RNA1509_58786} {RNA1509_28988, RNA1509_58786, RNA815_2775.1}
11. MligTC455_40187 270 5.62 Mlig455_049370

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=0.494

0.956 - - - - - 0.956 Mlig455_049370 {REF} {Length: 5146} {TRANSSPLICED} {RNA1509_31164, RNA1509_58180} {RNA1310_1836, RNA1509_58180} {RNA1509_58180, RNA815_1211}
12. MligTC455_32126 504 10.51 Mlig455_002779, Mlig455_066933

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.758/0.00025

TRIM31 0.954 0.954 - - - - -

Mlig455_002779 {REF} {Length: 3847} {TRANSSPLICED} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=38.3]; RING-type zinc-finger [PF13445.8, score=36.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.8]; Prokaryotic RING finger family 4 [PF14447.8, score=32.3]; Ring finger domain [PF13639.8, score=28.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.8]; zinc-RING finger domain [PF14634.8, score=27.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.5]} {Human: ENSG00000223531, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000204616, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000233573, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000224168, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000225130, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000226402, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000137397, TRIM31, tripartite motif containing 31, [RH, Score=58.2, Expect=2e-08]; ENSG00000224542, TRIM31, tripartite motif containing 31, [RH, Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000058063, Trim31, tripartite motif-containing 31, [RH, Score=53.5, Expect=4e-07]} {Dmel: FBgn0036897, CG8786, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=50.4, Expect=1e-06]} {RNA1509_21799} {RNA1310_16610, RNA1509_21799} {RNA1509_21799, RNA815_19239}

Mlig455_066933 {REF} {Length: 3550} {TRANSSPLICED} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=38.6]; RING-type zinc-finger [PF13445.8, score=36.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.1]; Prokaryotic RING finger family 4 [PF14447.8, score=32.8]; Ring finger domain [PF13639.8, score=29.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; zinc-RING finger domain [PF14634.8, score=27.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.8]} {Human: ENSG00000233573, TRIM31, tripartite motif containing 31, [RH, Score=63.5, Expect=3e-10]; ENSG00000226402, TRIM31, tripartite motif containing 31, [RH, Score=63.5, Expect=3e-10]; ENSG00000224168, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000223531, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000204616, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000225130, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000137397, TRIM31, tripartite motif containing 31, [RH, Score=62.8, Expect=5e-10]; ENSG00000224542, TRIM31, tripartite motif containing 31, [RH, Score=61.2, Expect=5e-10]} {Mouse: ENSMUSG00000058063, Trim31, tripartite motif-containing 31, [RH, Score=53.5, Expect=3e-07]} {Dmel: FBgn0036897, CG8786, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=50.4, Expect=1e-06]} {RNA1509_47313, RNA1509_48965} {RNA1310_43552, RNA1509_47313, RNA1509_48965} {RNA1509_47313, RNA1509_48965, RNA815_19239}
13. MligTC455_48460 388 8.09 Mlig455_033425

Neo: -

Age: -

0.954 0.954 - - - - - Mlig455_033425 {REF} {Length: 2270} {Smed: dd_Smed_v6_6902_0_1, dd_Smed_v6_6902_0_1, [Score=47.4, Expect=6e-08]} {RNA1509_24451, RNA1509_53002} {RNA1310_46996, RNA1509_24451} {RNA1509_24451, RNA815_14324.1}
14. MligTC455_51678 290 6.05 Mlig455_024353

Neo: -

Age: -

PRDM1 0.953 - - - - 0.953 - Mlig455_024353 {REF} {Length: 5035} {Human: ENSG00000057657, PRDM1, PR/SET domain 1, [Score=77.8, Expect=4e-14]} {Mouse: ENSMUSG00000038151, Prdm1, PR domain containing 1, with ZNF domain, [Score=85.1, Expect=2e-16]} {Dmel: FBgn0035625, Blimp-1, [Score=77.8, Expect=2e-14]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=72.4, Expect=7e-13]} {RNA1509_17032} {RNA1310_20903} {RNA815_21750}
15. MligTC455_27925 257 5.36 Mlig455_038131

Neo: -

Age: logFC(26M/2M)=0.373

Region-enriched R5: 2.346/0.00504

SCOC 0.952 0.952 - - - - - Mlig455_038131 {REF} {Length: 1290} {Pfam: Short coiled-coil protein [PF10224.11, score=82.0]; Myosin tail [PF01576.21, score=19.2]} {Human: ENSG00000153130, SCOC, short coiled-coil protein, [RH, Score=102, Expect=4e-29]} {Mouse: ENSMUSG00000063253, Scoc, short coiled-coil protein, [RH, Score=102, Expect=3e-29]} {Dmel: FBgn0039505, CG5934, [RH, Score=107, Expect=1e-30]} {Celegans: WBGene00006802, unc-69, Short coiled-coil domain-containing protein UNC-69 splice variant T07A5.6b, [RH, Score=80.1, Expect=8e-20]} {Smed: dd_Smed_v6_6577_0_3, dd_Smed_v6_6577_0_3, [RH, Score=94.7, Expect=3e-26]} {RNA1509_38570, RNA1509_46931} {RNA1310_25051.2, RNA1509_38570} {RNA1509_38570, RNA815_11190}
16. MligTC455_12872 149 3.1 Mlig455_057561

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 1.624/0.04283

0.951 - - - - - 0.951 Mlig455_057561 {REF} {Length: 1130} {RNA1509_29400} {RNA1310_15529} {RNA815_14251}
17. MligTC455_49628 82 1.7 Mlig455_043447

Neo: -

Age: -

SLC16A12 0.951 - - - - - 0.951 Mlig455_043447 {REF} {Length: 5313} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=105.0]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=114, Expect=5e-26]; ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [Score=114, Expect=5e-26]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=118, Expect=1e-27]} {Dmel: FBgn0035173, CG13907, [Score=336, Expect=9e-103]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=295, Expect=8e-89]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [RH, Score=409, Expect=2e-128]} {RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1310_5615, RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1509_13827, RNA1509_17254, RNA1509_27907, RNA815_8392}
18. MligTC455_04104 196 4.09 Mlig455_012083

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.482

Region-enriched R5: 2.703/0.00002

TMEM201 0.95 - - - - - 0.950 Mlig455_012083 {REF} {Length: 4140} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=110.5]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=128, Expect=2e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=130, Expect=5e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=123, Expect=5e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=3e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=7e-25]} {RNA1509_19432} {RNA1310_12592, RNA1509_19432} {RNA1509_19432, RNA815_559.1}
19. MligTC455_34528 264 5.5 Mlig455_060288

Neo: -

Age: -

RAD9A 0.95 0.950 - - - - - Mlig455_060288 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: Rad9 [PF04139.15, score=160.9]} {Human: ENSG00000172613, RAD9A, RAD9 checkpoint clamp component A, [RH, Score=153, Expect=2e-41]} {Mouse: ENSMUSG00000097909, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=154, Expect=5e-42]; ENSMUSG00000024824, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=154, Expect=5e-42]} {Smed: dd_Smed_v6_14121_0_1, dd_Smed_v6_14121_0_1, [RH, Score=167, Expect=4e-47]} {RNA1509_21321} {RNA1310_15353.1} {RNA815_16837}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA