TomoSeq data search

Data search

Results for MligTC455_09847

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_09847	49	1.03	Mlig455_008171, Mlig455_008210, Mlig455_069594	Neo: - Age: Down-Up-Up	AL031281.2, CDC42	Mlig455_008171 {REF} {Length: 849} {Pfam: Ras family [PF00071.24, score=78.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.3]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=140, Expect=2e-41]; ENSG00000070831, CDC42, cell division cycle 42, [Score=140, Expect=2e-41]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=140, Expect=1e-41]} {Dmel: FBgn0010341, Cdc42, [Score=136, Expect=3e-40]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=143, Expect=3e-43]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=122, Expect=5e-35]} {RNA1310_50317} {RNA815_24750} Mlig455_008210 {REF} {Length: 1780} {Pfam: Ras family [PF00071.24, score=103.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.8]} {Human: ENSG00000070831, CDC42, cell division cycle 42, [Score=170, Expect=1e-53]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=170, Expect=1e-53]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=170, Expect=9e-54]} {Dmel: FBgn0010341, Cdc42, [Score=174, Expect=3e-55]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=177, Expect=2e-56]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=159, Expect=8e-50]} {RNA1310_50317} {RNA815_24750} Mlig455_069594 {REF} {Length: 948} {Pfam: Ras family [PF00071.24, score=35.4]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=85.1, Expect=3e-19]; ENSG00000070831, CDC42, cell division cycle 42, [Score=85.1, Expect=3e-19]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=85.1, Expect=2e-19]} {Dmel: FBgn0010341, Cdc42, [Score=80.1, Expect=9e-18]} {Celegans: WBGene00015646, mlt-10, [Score=164, Expect=7e-46]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=70.1, Expect=3e-14]} {RNA1310_50317} {RNA815_24750}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_09847

1.03

Mlig455_008171, Mlig455_008210, Mlig455_069594

Neo: -

Age: Down-Up-Up

AL031281.2, CDC42

Mlig455_008171 {REF} {Length: 849} {Pfam: Ras family [PF00071.24, score=78.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.3]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=140, Expect=2e-41]; ENSG00000070831, CDC42, cell division cycle 42, [Score=140, Expect=2e-41]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=140, Expect=1e-41]} {Dmel: FBgn0010341, Cdc42, [Score=136, Expect=3e-40]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=143, Expect=3e-43]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=122, Expect=5e-35]} {RNA1310_50317} {RNA815_24750}

Mlig455_008210 {REF} {Length: 1780} {Pfam: Ras family [PF00071.24, score=103.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.8]} {Human: ENSG00000070831, CDC42, cell division cycle 42, [Score=170, Expect=1e-53]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=170, Expect=1e-53]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=170, Expect=9e-54]} {Dmel: FBgn0010341, Cdc42, [Score=174, Expect=3e-55]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=177, Expect=2e-56]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=159, Expect=8e-50]} {RNA1310_50317} {RNA815_24750}

Mlig455_069594 {REF} {Length: 948} {Pfam: Ras family [PF00071.24, score=35.4]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=85.1, Expect=3e-19]; ENSG00000070831, CDC42, cell division cycle 42, [Score=85.1, Expect=3e-19]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=85.1, Expect=2e-19]} {Dmel: FBgn0010341, Cdc42, [Score=80.1, Expect=9e-18]} {Celegans: WBGene00015646, mlt-10, [Score=164, Expect=7e-46]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=70.1, Expect=3e-14]} {RNA1310_50317} {RNA815_24750}

Cumulative graph for MligTC455_09847

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.582	1.264	0.99969	1.00000
RegionR2	-0.139	1.264	0.78825	1.00000
RegionR3	-2.138	1.264	0.99980	1.00000
RegionR4	3.208	1.264	0.05320	0.20113
RegionR5	1.757	1.264	0.17355	0.44494
RegionR6	0.245	1.264	0.59650	1.00000
RegionR7	-2.787	1.264	0.99957	1.00000
RegionR8	3.436	1.264	0.10347	0.60159

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.089	1.264	1.00000	1.00000
RegenerationR2	-1.505	1.264	0.42356	0.83019
RegenerationR3	1.457	1.264	0.29296	0.72519
RegenerationR4	-0.201	1.264	0.91471	1.00000
RegenerationR5	-0.427	1.264	0.87848	1.00000
RegenerationR6	1.137	1.264	0.62852	0.88580
RegenerationBL	-0.324	1.264	0.87669	1.00000
RegenerationTP	0.768	1.264	0.70752	1.00000

Genes with expression patterns similar to MligTC455_09847

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_09847	49	1.03	Mlig455_008171, Mlig455_008210, Mlig455_069594	Neo: - Age: Down-Up-Up	AL031281.2, CDC42	4	-	-	1.000	1.000	1.000	1.000	Mlig455_008171 {REF} {Length: 849} {Pfam: Ras family [PF00071.24, score=78.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.3]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=140, Expect=2e-41]; ENSG00000070831, CDC42, cell division cycle 42, [Score=140, Expect=2e-41]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=140, Expect=1e-41]} {Dmel: FBgn0010341, Cdc42, [Score=136, Expect=3e-40]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=143, Expect=3e-43]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=122, Expect=5e-35]} {RNA1310_50317} {RNA815_24750} Mlig455_008210 {REF} {Length: 1780} {Pfam: Ras family [PF00071.24, score=103.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.8]} {Human: ENSG00000070831, CDC42, cell division cycle 42, [Score=170, Expect=1e-53]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=170, Expect=1e-53]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=170, Expect=9e-54]} {Dmel: FBgn0010341, Cdc42, [Score=174, Expect=3e-55]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=177, Expect=2e-56]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=159, Expect=8e-50]} {RNA1310_50317} {RNA815_24750} Mlig455_069594 {REF} {Length: 948} {Pfam: Ras family [PF00071.24, score=35.4]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=85.1, Expect=3e-19]; ENSG00000070831, CDC42, cell division cycle 42, [Score=85.1, Expect=3e-19]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=85.1, Expect=2e-19]} {Dmel: FBgn0010341, Cdc42, [Score=80.1, Expect=9e-18]} {Celegans: WBGene00015646, mlt-10, [Score=164, Expect=7e-46]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=70.1, Expect=3e-14]} {RNA1310_50317} {RNA815_24750}
2.	MligTC455_15497	40	0.84	Mlig455_051320	Neo: - Age: logFC(26M/2M)=-0.656		0.988	-	-	-	-	0.988	-	Mlig455_051320 {REF} {Length: 1725} {TRANSSPLICED} {RNA1509_40047} {RNA1310_21235.1} {RNA815_15373}
3.	MligTC455_12021	82	1.71	Mlig455_035113	Neo: - Age: -		0.986	-	-	-	0.986	-	-	Mlig455_035113 {REF} {Length: 1638} {Pfam: Lectin C-type domain [PF00059.23, score=23.3]} {RNA1509_15746, RNA1509_30689} {RNA1310_39642, RNA1509_30689} {RNA1509_30689, RNA815_2585.3}
4.	MligTC455_49786	127	2.65	Mlig455_015160	Neo: Int S/G2/M Age: -		0.978	-	-	-	0.978	-	-	Mlig455_015160 {REF} {Length: 4010} {Pfam: NMDA receptor-regulated gene protein 2 C-terminus [PF10505.11, score=48.1]} {RNA1509_32951, RNA1509_49066} {RNA1310_4961, RNA1509_32951, RNA1509_49066} {RNA1509_32951, RNA1509_49066, RNA815_3973}
5.	MligTC455_10984	37	0.77	Mlig455_022539, Mlig455_022580	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_022539 {REF} {Length: 307} {NoTransDecoderORF} {RNA1310_32406} {RNA815_44793} Mlig455_022580 {REF} {Length: 460} {NoTransDecoderORF} {RNA1310_32406} {RNA815_44793}
6.	MligTC455_17488	125	2.6	Mlig455_042781	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.373	SULF1	0.965	-	-	-	0.965	-	-	Mlig455_042781 {REF} {Length: 3766} {TRANSSPLICED} {Pfam: Sulfatase [PF00884.25, score=141.9]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=22.0]} {Human: ENSG00000137573, SULF1, sulfatase 1, [Score=377, Expect=2e-119]; ENSG00000196562, SULF2, sulfatase 2, [Score=370, Expect=8e-117]} {Mouse: ENSMUSG00000016918, Sulf1, sulfatase 1, [Score=378, Expect=3e-120]; ENSMUSG00000006800, Sulf2, sulfatase 2, [Score=368, Expect=3e-116]} {Dmel: FBgn0040271, Sulf1, Sulfated, [Score=368, Expect=2e-114]} {Celegans: WBGene00006308, sul-1, Putative extracellular sulfatase Sulf-1 homolog, [Score=383, Expect=4e-124]} {RNA1509_36005} {RNA1310_5701} {RNA815_1813}
7.	MligTC455_30663	166	3.46	Mlig455_039624	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_039624 {REF} {Length: 905} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=22.2} {RNA1509_43863} {RNA1310_12417.1} {RNA815_12852.1}
8.	MligTC455_25460	203	4.23	Mlig455_017949	Neo: Irradiation Age: -	UTP25	0.955	-	-	-	0.955	-	-	Mlig455_017949 {REF} {Length: 2589} {TRANSSPLICED} {Pfam: Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 [PF06862.14, score=383.4]; DEAD/DEAH box helicase [PF00270.31, score=19.0]} {Human: ENSG00000117597, UTP25, UTP25, small subunit processor component, [RH, Score=293, Expect=4e-89]} {Mouse: ENSMUSG00000016181, Diexf, digestive organ expansion factor homolog (zebrafish), [RH, Score=286, Expect=2e-86]} {Dmel: FBgn0034933, CG3735, [RH, Score=253, Expect=1e-74]} {Celegans: WBGene00012756, Y41C4A.9, [RH, Score=191, Expect=4e-53]} {Smed: dd_Smed_v6_9470_0_1, dd_Smed_v6_9470_0_1, [RH, Score=153, Expect=1e-39]} {RNA1509_25312} {RNA1310_17305.1, RNA1509_25312} {RNA1509_25312, RNA815_9754}
9.	MligTC455_38195	432	9.01	Mlig455_063704	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.492	TRPM1	0.953	-	-	0.953	-	-	-	Mlig455_063704 {REF} {Length: 5184} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=94.9]; Ankyrin repeats (many copies) [PF13637.8, score=83.0]; Ankyrin repeats (many copies) [PF13857.8, score=63.8]; Ankyrin repeat [PF13606.8, score=61.6]; Ankyrin repeat [PF00023.32, score=55.8]; Ion transport protein [PF00520.33, score=53.8]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=132, Expect=2e-30]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=132, Expect=2e-30]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=129, Expect=1e-29]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=131, Expect=3e-30]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=129, Expect=9e-30]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=118, Expect=2e-26]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=79.0, Expect=2e-14]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [RH, Score=189, Expect=2e-49]} {RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269} {RNA1310_4916, RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269} {RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269, RNA815_3093}
10.	MligTC455_11343	15	0.32	Mlig455_036195	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_036195 {REF} {Length: 786} {NoTransDecoderORF} {RNA1310_121576} {RNA815_10011.1}
11.	MligTC455_39131	252	5.25	Mlig455_064329	Neo: - Age: logFC(26M/2M)=-0.399	SLC16A12	0.95	-	-	0.950	-	-	-	Mlig455_064329 {REF} {Length: 2601} {Pfam: Major Facilitator Superfamily [PF07690.18, score=127.6]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=122, Expect=9e-29]; ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [Score=120, Expect=2e-28]} {Mouse: ENSMUSG00000041920, Slc16a6, solute carrier family 16 (monocarboxylic acid transporters), member 6, [Score=121, Expect=2e-28]; ENSMUSG00000026220, Slc16a14, solute carrier family 16 (monocarboxylic acid transporters), member 14, [Score=119, Expect=5e-28]; ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=117, Expect=1e-27]} {Dmel: FBgn0033028, CG11665, [Score=147, Expect=6e-37]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=105, Expect=1e-23]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=116, Expect=2e-27]} {RNA1509_22159} {RNA1310_6776, RNA1509_22159} {RNA1509_22159, RNA815_11602}