M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_11015

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11015 19 0.40 Mlig455_010464

Neo: -

Age: Up-Down-Up

 Mlig455_010464 {REF} {Length: 1551} {RNA1310_22199.1} {RNA815_10412}

Cumulative graph for MligTC455_11015

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.574 0.651 0.99977 1.00000
RegionR2 -0.413 0.651 0.99946 1.00000
RegionR3 1.083 0.651 0.97272 1.00000
RegionR4 3.431 0.651 0.07174 0.24600
RegionR5 0.973 0.651 0.27483 0.60095
RegionR6 -0.917 0.651 0.99981 1.00000
RegionR7 -1.36 0.651 0.99979 1.00000
RegionR8 -1.222 0.651 0.99977 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.808 0.651 0.99974 1.00000
RegenerationR2 -0.359 0.651 0.93702 1.00000
RegenerationR3 -1.115 0.651 0.35146 0.77173
RegenerationR4 -0.882 0.651 0.28091 0.72597
RegenerationR5 0.337 0.651 0.44584 0.82829
RegenerationR6 -1.07 0.651 0.99978 1.00000
RegenerationBL -0.912 0.651 0.99988 1.00000
RegenerationTP -1.158 0.651 0.99975 1.00000


Genes with expression patterns similar to MligTC455_11015

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11015 19 0.4 Mlig455_010464

Neo: -

Age: Up-Down-Up

 1 - - 1.000 - - - Mlig455_010464 {REF} {Length: 1551} {RNA1310_22199.1} {RNA815_10412}
2. MligTC455_07711 15 0.31 Mlig455_035975

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_035975 {REF} {Length: 476} {NoTransDecoderORF} {RNA1509_35506} {RNA1310_3152.3} {RNA815_24414}
3. MligTC455_27813 66 1.37 Mlig455_071014

Neo: -

Age: -

 0.985 - - 0.985 - - - Mlig455_071014 {REF} {Length: 2810} {RNA1509_55315} {RNA1310_683.1} {RNA815_2170.1}
4. MligTC455_16866 18 0.37 Mlig455_065296

Neo: -

Age: -

 0.982 - - 0.982 - - - Mlig455_065296 {REF} {Length: 1827} {RNA1310_92472}
5. MligTC455_16867 18 0.37 Mlig455_065319

Neo: -

Age: -

 0.982 - - 0.982 - - - Mlig455_065319 {REF} {Length: 1743} {RNA1310_92472}
6. MligTC455_22231 40 0.84 Mlig455_032140

Neo: -

Age: -

 0.98 - - 0.980 - - - Mlig455_032140 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_38388} {RNA1310_14332} {RNA815_16291}
7. MligTC455_18746 23 0.47 Mlig455_024831

Neo: -

Age: -

Region-enriched R4: 8.220/0.00001

Regeneration-depleted R4: -6.352
Regeneration-depleted R3: -3.721
Regeneration-depleted R2: -1.825

 0.972 - - 0.972 - - - Mlig455_024831 {REF} {Length: 1230} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_9302} {RNA1310_672.1} {RNA815_6919}
8. MligTC455_51127 32 0.66 Mlig455_054349

Neo: -

Age: -

 GLRA2 0.97 - - 0.970 - - - Mlig455_054349 {REF} {Length: 2070} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=108.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=317, Expect=6e-102]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=316, Expect=1e-101]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=312, Expect=3e-100]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=317, Expect=3e-102]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=316, Expect=1e-101]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=308, Expect=1e-98]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=3e-91]} {Celegans: WBGene00020767, lgc-40, Ligand-Gated ion Channel, [RH, Score=260, Expect=4e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=261, Expect=1e-80]} {RNA1310_34255} {RNA815_61641}
9. MligTC455_27149 162 3.38 Mlig455_010166

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-2.585

Region-enriched R3: 5.671/0.00012
Region-enriched R2: 4.829/0.04858

 0.968 - - 0.968 - - - Mlig455_010166 {REF} {Length: 595} {RNA1509_40054} {RNA1310_45578.1} {RNA815_7257.5}
10. MligTC455_19966 28 0.59 Mlig455_007419

Neo: -

Age: Up-Down-Down

 0.967 - - 0.967 - - - Mlig455_007419 {REF} {Length: 1601} {NoTransDecoderORF} {RNA1509_51785} {RNA1310_77392} {RNA815_14770.1}
11. MligTC455_12384 30 0.62 Mlig455_014121, Mlig455_014129

Neo: -

Age: -

Regeneration-downregulated R2: -5.903

Regeneration-depleted R2: -5.903

 MARK3, MARK4 0.966 - - 0.966 - - -

Mlig455_014121 {REF} {Length: 3626} {Pfam: Protein kinase domain [PF00069.27, score=234.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.3]; Kinase-like [PF14531.8, score=26.9]; ABC1 atypical kinase-like domain [PF03109.18, score=21.4]; Ternary complex associated domain 9 [PF19974.1, score=18.3]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=219, Expect=7e-60]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=215, Expect=2e-58]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=212, Expect=2e-57]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=217, Expect=4e-59]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=215, Expect=1e-58]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=213, Expect=1e-57]} {Dmel: FBgn0026063, KP78b, [Score=218, Expect=1e-60]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=220, Expect=5e-59]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=414, Expect=7e-133]} {RNA1310_41210} {RNA815_38347}

Mlig455_014129 {REF} {Length: 3531} {Pfam: Protein kinase domain [PF00069.27, score=107.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.2]} {Human: ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=93.2, Expect=3e-19]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=86.7, Expect=3e-17]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=84.0, Expect=2e-16]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0262103, Sik3, Salt-inducible kinase 3, [Score=87.4, Expect=2e-17]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=86.3, Expect=3e-17]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=151, Expect=1e-38]} {RNA1310_80369} {RNA815_38347}
12. MligTC455_13098 19 0.4 Mlig455_020992

Neo: -

Age: -

 C1GALT1 0.964 - - 0.964 - - - Mlig455_020992 {REF} {Length: 1108} {Pfam: Galactosyltransferase [PF01762.23, score=27.6]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=160, Expect=3e-46]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=162, Expect=1e-46]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=138, Expect=8e-38]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=165, Expect=4e-48]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=185, Expect=3e-56]} {RNA1310_125941}
13. MligTC455_13572 23 0.47 Mlig455_017474

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_017474 {REF} {Length: 2992} {RNA1310_13412} {RNA815_21127}
14. MligTC455_16509 21 0.44 Mlig455_017525, Mlig455_019044

Neo: -

Age: Up-Down-Up

 0.964 - - 0.964 - - -

Mlig455_017525 {REF} {Length: 792} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=88.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=57.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=43.3]; Integrase core domain [PF00665.28, score=27.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=22.3]; Aspartyl protease [PF13650.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=229, Expect=1e-64]} {RNA1509_46846} {RNA1310_8296} {RNA815_40201}

Mlig455_019044 {REF} {Length: 3591} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=88.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=57.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=43.3]; Integrase core domain [PF00665.28, score=27.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=22.3]; Aspartyl protease [PF13650.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=229, Expect=1e-64]} {RNA1509_46846} {RNA1310_8296, RNA1509_46846} {RNA1509_46846, RNA815_22609}
15. MligTC455_32278 31 0.65 Mlig455_041080

Neo: -

Age: Up-Down-Down

 USH2A 0.964 - - 0.964 - - - Mlig455_041080 {REF} {Length: 15804} {Pfam: Fibronectin type III domain [PF00041.23, score=464.0]; Laminin EGF domain [PF00053.26, score=197.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=110.9]; Laminin G domain [PF02210.26, score=79.7]; Laminin G domain [PF00054.25, score=43.4]; Fibronectin type III domain [PF16893.7, score=43.3]; Chitinase A, N-terminal domain [PF08329.12, score=22.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=20.5]} {Human: ENSG00000042781, USH2A, usherin, [Score=1148, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1111, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=265, Expect=7e-70]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=267, Expect=1e-70]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=229, Expect=2e-59]} {RNA1509_43154} {RNA1310_15599} {RNA815_35868}
16. MligTC455_35643 13 0.28 Mlig455_034753

Neo: -

Age: -

 NPY4R2 0.964 - - 0.964 - - - Mlig455_034753 {REF} {Length: 2924} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.0]} {Human: ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=99.0, Expect=3e-22]; ENSG00000204174, NPY4R, neuropeptide Y receptor Y4, [Score=95.9, Expect=4e-21]} {Mouse: ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=112, Expect=5e-27]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=128, Expect=2e-32]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=125, Expect=1e-31]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=194, Expect=1e-56]} {RNA1310_122559.1}
17. MligTC455_37338 40 0.84 Mlig455_035280

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_035280 {REF} {Length: 2442} {RNA1310_17149} {RNA815_15957}
18. MligTC455_17976 81 1.68 Mlig455_002059

Neo: -

Age: -

 0.963 - - 0.963 - - - Mlig455_002059 {REF} {Length: 730} {RNA1310_56725} {RNA815_29666}
19. MligTC455_28116 36 0.74 Mlig455_023222, Mlig455_068295

Neo: -

Age: Down-Down-Up

 0.963 - - 0.963 - - -

Mlig455_023222 {REF} {Length: 2305} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}

Mlig455_068295 {REF} {Length: 1692} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}
20. MligTC455_12393 23 0.48 Mlig455_065564

Neo: -

Age: -

 SSTR5 0.962 - - 0.962 - - - Mlig455_065564 {REF} {Length: 2085} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=121.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=24.9]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=91.3, Expect=2e-19]; ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=89.4, Expect=1e-18]} {Mouse: ENSMUSG00000045052, Prlhr, prolactin releasing hormone receptor, [Score=103, Expect=8e-24]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=102, Expect=2e-23]; ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=102, Expect=3e-23]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=114, Expect=8e-27]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=7e-23]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [Score=191, Expect=5e-54]} {RNA1509_59439} {RNA1310_49826} {RNA815_38569}
21. MligTC455_33016 46 0.96 Mlig455_030897

Neo: -

Age: -

 UTP20 0.959 - - 0.959 - - - Mlig455_030897 {REF} {Length: 9860} {TRANSSPLICED} {Pfam: Down-regulated in metastasis [PF07539.14, score=169.0]} {Human: ENSG00000120800, UTP20, UTP20, small subunit processome component, [Score=269, Expect=3e-71]} {Mouse: ENSMUSG00000004356, Utp20, UTP20 small subunit processome component, [RH, Score=271, Expect=3e-72]} {Dmel: FBgn0034734, CG4554, [RH, Score=181, Expect=6e-45]} {Celegans: WBGene00007050, utp-20, UTP small subunit (SSU) processome component homolog, [RH, Score=167, Expect=7e-41]} {Smed: dd_Smed_v6_5777_0_1, dd_Smed_v6_5777_0_1, [Score=130, Expect=1e-29]} {RNA1509_30314} {RNA1310_332, RNA1509_30314} {RNA1509_30314, RNA815_127.1}
22. MligTC455_37837 39 0.81 Mlig455_060764

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_060764 {REF} {Length: 489} {NoTransDecoderORF} {RNA1310_49408} {RNA815_26583}
23. MligTC455_43506 73 1.53 Mlig455_006107

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.595

 0.958 - - 0.958 - - - Mlig455_006107 {REF} {Length: 703} {RNA1509_17222} {RNA1310_44913.1} {RNA815_37256}
24. MligTC455_49470 54 1.13 Mlig455_054252

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.395

Region-enriched R3: 5.217/0.00090

 B3GNT5 0.958 - - 0.958 - - - Mlig455_054252 {REF} {Length: 3081} {Pfam: Galactosyltransferase [PF01762.23, score=90.8]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=99.4, Expect=6e-22]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [Score=89.0, Expect=6e-19]} {Dmel: FBgn0000221, brn, brainiac, [Score=77.4, Expect=3e-15]} {Celegans: WBGene00044630, bus-17, Hexosyltransferase, [RH, Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_13702_0_1, dd_Smed_v6_13702_0_1, [RH, Score=170, Expect=1e-47]} {RNA1509_54587} {RNA1310_18654} {RNA815_8083}
25. MligTC455_31767 25 0.51 Mlig455_006259, Mlig455_006321, Mlig455_061205

Neo: -

Age: -

 0.957 - - 0.957 - - -

Mlig455_006259 {REF} {Length: 247} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}

Mlig455_006321 {REF} {Length: 124} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}

Mlig455_061205 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}
26. MligTC455_34332 28 0.59 Mlig455_005058

Neo: -

Age: -

 NKX3-2 0.957 - - 0.957 - - - Mlig455_005058 {REF} {Length: 1884} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=118, Expect=4e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=118, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=7e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=90.9, Expect=7e-20]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
27. MligTC455_34333 29 0.59 Mlig455_005256

Neo: -

Age: -

 NKX3-2 0.957 - - 0.957 - - - Mlig455_005256 {REF} {Length: 1971} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=119, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=5e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
28. MligTC455_36995 217 4.52 Mlig455_040359

Neo: -

Age: Down-Up-Up

Region-enriched R2: 6.534/0.00155
Region-enriched R3: 5.197/0.00130

 0.957 - - 0.957 - - - Mlig455_040359 {REF} {Length: 759} {RNA1509_59636} {RNA1310_6145.1, RNA1509_59636} {RNA1509_59636, RNA815_27612}
29. MligTC455_22432 196 4.08 Mlig455_029198

Neo: -

Age: -

Region-enriched R3: 2.322/0.03362

 0.955 - - 0.955 - - - Mlig455_029198 {REF} {Length: 2065} {RNA1509_24153} {RNA1310_5420} {RNA815_3759}
30. MligTC455_43193 359 7.49 Mlig455_033211

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_033211 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_121983}
31. MligTC455_14145 21 0.44 Mlig455_019525

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_019525 {REF} {Length: 589} {RNA1310_32376.1} {RNA815_45036}
32. MligTC455_20008 45 0.95 Mlig455_016377

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_016377 {REF} {Length: 2038} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=148.2]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=52.4, Expect=4e-07]} {RNA1310_87656}
33. MligTC455_13571 22 0.46 Mlig455_017396

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_017396 {REF} {Length: 2929} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=23.0]; Transmembrane protein 51 [PF15345.8, score=21.9]; RNA polymerase I-specific transcription-initiation factor [PF10214.11, score=20.8]; Ctr copper transporter family [PF04145.17, score=20.5]; ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=19.0]; Mechanosensitive ion channel inner membrane domain 1 [PF12794.9, score=17.5]} {RNA1310_13412} {RNA815_37792}
34. MligTC455_29464 25 0.53 Mlig455_021892

Neo: -

Age: -

 SDCCAG8 0.951 - - 0.951 - - - Mlig455_021892 {REF} {Length: 3036} {Pfam: Centrosomal colon cancer autoantigen protein family [PF15964.7, score=164.7]} {Human: ENSG00000276111, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]; ENSG00000054282, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000026504, Sdccag8, serologically defined colon cancer antigen 8, [RH, Score=109, Expect=4e-24]} {Dmel: FBgn0266566, CG45105, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_9295_0_2, dd_Smed_v6_9295_0_2, [RH, Score=87.8, Expect=7e-18]} {RNA1509_42574} {RNA1310_5942.1} {RNA815_9353.1}
35. MligTC455_10196 48 1 Mlig455_035825

Neo: -

Age: logFC(26M/2M)=-0.579

 SOX7 0.95 - - 0.950 - - - Mlig455_035825 {REF} {Length: 1154} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=74.3]; HMG-box domain [PF09011.12, score=30.4]; Pleckstrin homology domain [PF15404.8, score=20.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.5]} {Human: ENSG00000285438, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000171056, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000203883, SOX18, SRY-box 18, [Score=115, Expect=3e-29]; ENSG00000125398, SOX9, SRY-box 9, [Score=113, Expect=5e-28]; ENSG00000164736, SOX17, SRY-box 17, [Score=113, Expect=2e-28]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [RH, Score=123, Expect=2e-34]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=116, Expect=4e-29]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=107, Expect=5e-28]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=105, Expect=1e-26]} {RNA1310_54737.1} {RNA815_42176}
36. MligTC455_52122 1435 29.9 Mlig455_035226, Mlig455_035273

Neo: -

Age: -

Region-enriched R3: 3.936/0.00000
Region-enriched R2: 3.858/0.00018

 0.95 - - 0.950 - - -

Mlig455_035226 {REF} {Length: 725} {TRANSSPLICED} {RNA1509_39421} {RNA1310_8553.2, RNA1509_39421} {RNA1509_39421, RNA815_2974.1}

Mlig455_035273 {REF} {Length: 1422} {RNA1509_24257, RNA1509_39421} {RNA1310_8553.2, RNA1509_24257} {RNA1509_24257, RNA815_2974.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA