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Results for MligTC455_18485

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18485 31 0.64 Mlig455_025676

Neo: -

Age: logFC(26M/2M)=-0.535

 BEST3 Mlig455_025676 {REF} {Length: 2042} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=192.0]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=130, Expect=4e-31]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=128, Expect=7e-31]; ENSMUSG00000020169, Best3, bestrophin 3, [Score=127, Expect=2e-30]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=122, Expect=6e-29]} {Celegans: WBGene00009340, best-14, Bestrophin homolog 14, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=236, Expect=9e-71]} {RNA1509_5589} {RNA1310_3796.1} {RNA815_2846.1}

Cumulative graph for MligTC455_18485

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.41 1.179 0.99975 1.00000
RegionR2 0.853 1.179 0.57143 0.93083
RegionR3 2.413 1.179 0.09474 0.54141
RegionR4 1.142 1.179 0.44037 0.76918
RegionR5 0.955 1.179 0.43322 0.79325
RegionR6 0.893 1.179 0.50061 1.00000
RegionR7 -2.517 1.179 1.00000 1.00000
RegionR8 -2.328 1.179 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.736 1.179 0.99995 1.00000
RegenerationR2 0.152 1.179 0.87895 1.00000
RegenerationR3 -0.137 1.179 0.83203 0.99147
RegenerationR4 0.956 1.179 0.59820 0.91256
RegenerationR5 -2.106 1.179 0.10669 0.49426
RegenerationR6 0.591 1.179 0.69502 0.92177
RegenerationBL 2.19 1.179 0.30972 0.67506
RegenerationTP -0.512 1.179 0.99989 1.00000


Genes with expression patterns similar to MligTC455_18485

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18485 31 0.64 Mlig455_025676

Neo: -

Age: logFC(26M/2M)=-0.535

 BEST3 3 - - 1.000 1.000 1.000 - Mlig455_025676 {REF} {Length: 2042} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=192.0]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=130, Expect=4e-31]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=128, Expect=7e-31]; ENSMUSG00000020169, Best3, bestrophin 3, [Score=127, Expect=2e-30]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=122, Expect=6e-29]} {Celegans: WBGene00009340, best-14, Bestrophin homolog 14, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=236, Expect=9e-71]} {RNA1509_5589} {RNA1310_3796.1} {RNA815_2846.1}
2. MligTC455_53886 123 2.56 Mlig455_068271

Neo: -

Age: Down-Up-Down

 STARD10 1.823 - - 0.974 0.849 - - Mlig455_068271 {REF} {Length: 2322} {TRANSSPLICED} {Pfam: START domain [PF01852.21, score=105.5]} {Human: ENSG00000214530, STARD10, StAR related lipid transfer domain containing 10, [Score=206, Expect=6e-65]} {Mouse: ENSMUSG00000030688, Stard10, START domain containing 10, [Score=207, Expect=9e-66]} {Celegans: WBGene00012127, T28D6.7, [RH, Score=216, Expect=4e-69]} {Smed: dd_Smed_v6_498_0_1, dd_Smed_v6_498_0_1, [RH, Score=294, Expect=4e-100]} {RNA1509_25193} {RNA1310_26702.1} {RNA815_13572.1}
3. MligTC455_21785 107 2.24 Mlig455_005064

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=-0.389

 KRIT1 0.988 - - 0.988 - - - Mlig455_005064 {REF} {Length: 4037} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeat [PF00023.32, score=35.8]; Ankyrin repeat [PF13606.8, score=32.7]; FERM central domain [PF00373.20, score=26.3]} {Human: ENSG00000001631, KRIT1, KRIT1, ankyrin repeat containing, [RH, Score=218, Expect=2e-60]; ENSG00000285953, AC000120.3, novel protein, [RH, Score=209, Expect=2e-57]} {Mouse: ENSMUSG00000000600, Krit1, KRIT1, ankyrin repeat containing, [RH, Score=207, Expect=1e-56]} {Dmel: FBgn0029137, Patsas, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00013955, kri-1, KRIT 1 (Krev interaction trapped/cerebral cavernous malformation 1) homolog; Krev interaction trapped/cerebral cavernous malformation 1 isoform a, [RH, Score=85.9, Expect=5e-17]} {Smed: dd_Smed_v6_10935_0_1, dd_Smed_v6_10935_0_1, [RH, Score=137, Expect=3e-33]} {RNA1509_17918} {RNA1310_6799, RNA1509_17918} {RNA1509_17918, RNA815_1724}
4. MligTC455_08846 13 0.26 Mlig455_051270

Neo: -

Age: -

 0.987 - - 0.987 - - - Mlig455_051270 {REF} {Length: 1527} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_73804} {RNA815_59042}
5. MligTC455_00155 8 0.17 Mlig455_044547

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_044547 {REF} {Length: 223} {NoTransDecoderORF} {RNA1310_3234}
6. MligTC455_22013 85 1.78 Mlig455_005596, Mlig455_053497, Mlig455_062221

Neo: -

Age: Up-Down-Down

 RTL1 0.957 - - 0.957 - - -

Mlig455_005596 {REF} {Length: 4617} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.3]; Integrase zinc binding domain [PF17921.3, score=62.4]; Integrase core domain [PF00665.28, score=40.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.3, Expect=1e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.2, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=243, Expect=2e-68]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192}

Mlig455_053497 {REF} {Length: 2290} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=48.6]; 2-cysteine adaptor domain [PF08793.12, score=38.9]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=38.0]; Suppressor of cytokine signalling [PF12610.10, score=19.9]; Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain [PF17927.3, score=19.5]} {RNA1509_39864} {RNA1310_103404} {RNA815_38442}

Mlig455_062221 {REF} {Length: 3363} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.5]; Aspartyl protease [PF13650.8, score=26.8]; PNMA [PF14893.8, score=21.9]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=62.4, Expect=4e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=179, Expect=3e-46]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192}
7. MligTC455_32224 245 5.1 Mlig455_048779

Neo: -

Age: -

 EFCAB7 0.952 - - 0.952 - - - Mlig455_048779 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=71.0]; EF-hand domain pair [PF13499.8, score=67.2]; EF-hand domain [PF13405.8, score=63.7]; EF hand [PF13202.8, score=63.0]; EF-hand domain pair [PF13833.8, score=45.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=24.0]; EF hand [PF14788.8, score=19.7]} {Human: ENSG00000203965, EFCAB7, EF-hand calcium binding domain 7, [Score=153, Expect=6e-39]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=72.8, Expect=1e-14]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=57.0, Expect=2e-09]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=57.8, Expect=1e-09]} {Smed: dd_Smed_v6_12168_0_1, dd_Smed_v6_12168_0_1, [Score=186, Expect=4e-51]} {RNA1509_55933} {RNA1310_1543.2, RNA1509_55933} {RNA1509_55933, RNA815_2194}
8. MligTC455_13406 43 0.9 Mlig455_023240

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_023240 {REF} {Length: 908} {NoTransDecoderORF} {RNA1509_40851} {RNA1310_54245, RNA1509_40851} {RNA1509_40851, RNA815_32273}

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