Data search
Results for MligTC455_32224
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32224 | 245 | 5.10 | Mlig455_048779 | Neo: - Age: - |
EFCAB7 | Mlig455_048779 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=71.0]; EF-hand domain pair [PF13499.8, score=67.2]; EF-hand domain [PF13405.8, score=63.7]; EF hand [PF13202.8, score=63.0]; EF-hand domain pair [PF13833.8, score=45.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=24.0]; EF hand [PF14788.8, score=19.7]} {Human: ENSG00000203965, EFCAB7, EF-hand calcium binding domain 7, [Score=153, Expect=6e-39]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=72.8, Expect=1e-14]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=57.0, Expect=2e-09]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=57.8, Expect=1e-09]} {Smed: dd_Smed_v6_12168_0_1, dd_Smed_v6_12168_0_1, [Score=186, Expect=4e-51]} {RNA1509_55933} {RNA1310_1543.2, RNA1509_55933} {RNA1509_55933, RNA815_2194} |
Cumulative graph for MligTC455_32224
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.335 | 2.729 | 0.30878 | 0.95791 | |
| RegionR2 | 1.118 | 2.729 | 0.07437 | 0.33318 | |
| RegionR3 | 0.345 | 2.729 | 0.41770 | 0.94247 | |
| RegionR4 | -0.513 | 2.729 | 0.44772 | 0.77688 | |
| RegionR5 | -1.117 | 2.729 | 0.01022 | 0.05865 | |
| RegionR6 | -0.15 | 2.729 | 0.74831 | 1.00000 | |
| RegionR7 | -0.711 | 2.729 | 0.30474 | 0.93929 | |
| RegionR8 | -0.307 | 2.729 | 0.69205 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.406 | 2.729 | 0.29059 | 0.98928 | |
| RegenerationR2 | -0.464 | 2.729 | 0.33169 | 0.76849 | |
| RegenerationR3 | -0.06 | 2.729 | 0.92295 | 1.00000 | |
| RegenerationR4 | -0.137 | 2.729 | 0.82219 | 0.99487 | |
| RegenerationR5 | -0.048 | 2.729 | 0.92288 | 1.00000 | |
| RegenerationR6 | -0.503 | 2.729 | 0.47235 | 0.78594 | |
| RegenerationBL | 0.328 | 2.729 | 0.73325 | 1.00000 | |
| RegenerationTP | -0.63 | 2.729 | 0.51844 | 0.91321 |
Genes with expression patterns similar to MligTC455_32224
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32224 | 245 | 5.1 | Mlig455_048779 | Neo: - Age: - |
EFCAB7 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048779 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=71.0]; EF-hand domain pair [PF13499.8, score=67.2]; EF-hand domain [PF13405.8, score=63.7]; EF hand [PF13202.8, score=63.0]; EF-hand domain pair [PF13833.8, score=45.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=24.0]; EF hand [PF14788.8, score=19.7]} {Human: ENSG00000203965, EFCAB7, EF-hand calcium binding domain 7, [Score=153, Expect=6e-39]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=72.8, Expect=1e-14]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=57.0, Expect=2e-09]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=57.8, Expect=1e-09]} {Smed: dd_Smed_v6_12168_0_1, dd_Smed_v6_12168_0_1, [Score=186, Expect=4e-51]} {RNA1509_55933} {RNA1310_1543.2, RNA1509_55933} {RNA1509_55933, RNA815_2194} |
| 2. | MligTC455_17241 | 51 | 1.06 | Mlig455_031641 | Neo: - Age: - |
1.672 | - | - | 0.950 | - | - | 0.722 | Mlig455_031641 {REF} {Length: 1430} {NoTransDecoderORF} {RNA1509_31207} {RNA815_58763} | |
| 3. | MligTC455_28315 | 110 | 2.29 | Mlig455_030359 | Neo: - Age: - |
0.986 | - | - | 0.986 | - | - | - | Mlig455_030359 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_71196} {RNA815_23623} | |
| 4. | MligTC455_53886 | 123 | 2.56 | Mlig455_068271 | Neo: - Age: Down-Up-Down |
STARD10 | 0.978 | - | - | 0.978 | - | - | - | Mlig455_068271 {REF} {Length: 2322} {TRANSSPLICED} {Pfam: START domain [PF01852.21, score=105.5]} {Human: ENSG00000214530, STARD10, StAR related lipid transfer domain containing 10, [Score=206, Expect=6e-65]} {Mouse: ENSMUSG00000030688, Stard10, START domain containing 10, [Score=207, Expect=9e-66]} {Celegans: WBGene00012127, T28D6.7, [RH, Score=216, Expect=4e-69]} {Smed: dd_Smed_v6_498_0_1, dd_Smed_v6_498_0_1, [RH, Score=294, Expect=4e-100]} {RNA1509_25193} {RNA1310_26702.1} {RNA815_13572.1} |
| 5. | MligTC455_18627 | 77 | 1.61 | Mlig455_053723 | Neo: - Age: - |
0.972 | - | - | - | 0.972 | - | - | Mlig455_053723 {REF} {Length: 737} {NoTransDecoderORF} {RNA1310_6614} {RNA815_29574} | |
| 6. | MligTC455_21785 | 107 | 2.24 | Mlig455_005064 | Neo: - |
KRIT1 | 0.968 | - | - | 0.968 | - | - | - | Mlig455_005064 {REF} {Length: 4037} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeat [PF00023.32, score=35.8]; Ankyrin repeat [PF13606.8, score=32.7]; FERM central domain [PF00373.20, score=26.3]} {Human: ENSG00000001631, KRIT1, KRIT1, ankyrin repeat containing, [RH, Score=218, Expect=2e-60]; ENSG00000285953, AC000120.3, novel protein, [RH, Score=209, Expect=2e-57]} {Mouse: ENSMUSG00000000600, Krit1, KRIT1, ankyrin repeat containing, [RH, Score=207, Expect=1e-56]} {Dmel: FBgn0029137, Patsas, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00013955, kri-1, KRIT 1 (Krev interaction trapped/cerebral cavernous malformation 1) homolog; Krev interaction trapped/cerebral cavernous malformation 1 isoform a, [RH, Score=85.9, Expect=5e-17]} {Smed: dd_Smed_v6_10935_0_1, dd_Smed_v6_10935_0_1, [RH, Score=137, Expect=3e-33]} {RNA1509_17918} {RNA1310_6799, RNA1509_17918} {RNA1509_17918, RNA815_1724} |
| 7. | MligTC455_08846 | 13 | 0.26 | Mlig455_051270 | Neo: - Age: - |
0.963 | - | - | 0.963 | - | - | - | Mlig455_051270 {REF} {Length: 1527} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_73804} {RNA815_59042} | |
| 8. | MligTC455_43667 | 251 | 5.24 | Mlig455_070631 | Neo: - Age: Down-Down-Up |
KY | 0.96 | - | - | - | - | - | 0.960 | Mlig455_070631 {REF} {Length: 5010} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=114, Expect=3e-25]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=114, Expect=3e-25]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=151, Expect=4e-37]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=139, Expect=2e-34]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=136, Expect=4e-32]} {RNA1509_26818, RNA1509_52206, RNA1509_7582} {RNA1310_2203, RNA1509_26818, RNA1509_52206, RNA1509_7582} {RNA1509_26818, RNA1509_52206, RNA1509_7582, RNA815_6135} |
| 9. | MligTC455_23090 | 110 | 2.28 | Mlig455_010355 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_010355 {REF} {Length: 2269} {RNA1509_44577} {RNA1310_44961.1} {RNA815_37684} | |
| 10. | MligTC455_18485 | 31 | 0.64 | Mlig455_025676 | Neo: - Age: logFC(26M/2M)=-0.535 |
BEST3 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_025676 {REF} {Length: 2042} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=192.0]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=130, Expect=4e-31]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=128, Expect=7e-31]; ENSMUSG00000020169, Best3, bestrophin 3, [Score=127, Expect=2e-30]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=122, Expect=6e-29]} {Celegans: WBGene00009340, best-14, Bestrophin homolog 14, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=236, Expect=9e-71]} {RNA1509_5589} {RNA1310_3796.1} {RNA815_2846.1} |
Berezikov Lab - 2020-2021 © ERIBA