Data search


search
Exact
Search

Results for MligTC455_37645

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37645 245 5.11 Mlig455_009094

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.736

Mlig455_009094 {REF} {Length: 1970} {RNA1509_21906} {RNA1310_21443.1} {RNA815_8970.1}

Cumulative graph for MligTC455_37645

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.284 2.897 0.39725 1.00000
RegionR2 0.624 2.897 0.53914 0.90812
RegionR3 0.348 2.897 0.69123 1.00000
RegionR4 1.45 2.897 0.11635 0.34017
RegionR5 -0.462 2.897 0.95338 1.00000
RegionR6 1.112 2.897 0.20118 0.77340
RegionR7 0.008 2.897 0.86252 1.00000
RegionR8 1.204 2.897 0.38603 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.077 2.897 0.99987 1.00000
RegenerationR2 0.77 2.897 0.12785 0.55222
RegenerationR3 0.777 2.897 0.21642 0.65278
RegenerationR4 0.072 2.897 0.90777 1.00000
RegenerationR5 1.486 2.897 0.01623 0.22122
RegenerationR6 -0.125 2.897 0.83301 0.99278
RegenerationBL 1.167 2.897 0.10388 0.38034
RegenerationTP 1.472 2.897 0.07811 0.44643


Genes with expression patterns similar to MligTC455_37645

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37645 245 5.11 Mlig455_009094

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.736

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_009094 {REF} {Length: 1970} {RNA1509_21906} {RNA1310_21443.1} {RNA815_8970.1}
2. MligTC455_41099 799 16.65 Mlig455_028455

Neo: -

Age: Down-Down-Up

SULT1B1 1.754 - - 0.804 - 0.950 - Mlig455_028455 {REF} {Length: 1453} {Pfam: Sulfotransferase domain [PF00685.29, score=168.8]; Sulfotransferase family [PF13469.8, score=40.4]} {Human: ENSG00000173597, SULT1B1, sulfotransferase family 1B member 1, [Score=124, Expect=9e-33]; ENSG00000196228, SULT1C3, sulfotransferase family 1C member 3, [Score=120, Expect=1e-31]; ENSG00000197165, SULT1A2, sulfotransferase family 1A member 2, [Score=120, Expect=2e-31]; ENSG00000261052, SULT1A3, sulfotransferase family 1A member 3, [Score=119, Expect=6e-31]; ENSG00000213648, SULT1A4, sulfotransferase family 1A member 4, [Score=119, Expect=6e-31]; ENSG00000198203, SULT1C2, sulfotransferase family 1C member 2, [Score=118, Expect=1e-30]} {Mouse: ENSMUSG00000048473, Sult6b2, sulfotransferase family 6B, member 2, [RH, Score=128, Expect=8e-35]} {Dmel: FBgn0034887, St1, Sulfotransferase 1, [Score=94.7, Expect=6e-22]} {Celegans: WBGene00013748, ssu-1, Suppressor of Stomatin mutant Uncoordination, [RH, Score=117, Expect=7e-30]} {Smed: dd_Smed_v6_38079_0_1, dd_Smed_v6_38079_0_1, [Score=104, Expect=5e-26]} {RNA1509_16441} {RNA1310_25835, RNA1509_16441} {RNA1509_16441, RNA815_14619}
3. MligTC455_34887 559 11.64 Mlig455_054994

Neo: -

Age: -

PROM1 0.976 - - - - - 0.976 Mlig455_054994 {REF} {Length: 5116} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=237.2]; Predicted membrane protein (DUF2207) [PF09972.11, score=18.8]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=103, Expect=6e-22]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [RH, Score=142, Expect=3e-34]} {Smed: dd_Smed_v6_1386_0_1, dd_Smed_v6_1386_0_1, [RH, Score=156, Expect=2e-39]} {RNA1509_10333, RNA1509_36111, RNA1509_47961, RNA1509_57078} {RNA1310_3366.1, RNA1509_36111, RNA1509_47961, RNA1509_57078} {RNA1509_36111, RNA1509_47961, RNA1509_57078, RNA815_6629}
4. MligTC455_29762 62 1.29 Mlig455_061431

Neo: -

Age: logFC(26M/2M)=0.670

BEST1 0.972 - - - - 0.972 - Mlig455_061431 {REF} {Length: 4616} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.0]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=124, Expect=3e-30]; ENSG00000127325, BEST3, bestrophin 3, [Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=2e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=227, Expect=7e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=172, Expect=6e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=354, Expect=2e-117]} {RNA1509_54677} {RNA1310_17634, RNA1509_54677} {RNA1509_54677, RNA815_11997}
5. MligTC455_37452 116 2.42 Mlig455_046278

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_046278 {REF} {Length: 4416} {Pfam: Antitoxin VbhA [PF18495.3, score=20.4]} {RNA1509_26805, RNA1509_49672} {RNA1310_2903.3, RNA1509_49672} {RNA1509_49672, RNA815_6251}
6. MligTC455_49339 98 2.04 Mlig455_049269

Neo: -

Age: -

TRIM22 0.964 - - - - - 0.964 Mlig455_049269 {REF} {Length: 3234} {tRNA: Ser(AGA), score=94.9} {Pfam: NHL repeat [PF01436.23, score=35.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.3]; RING-type zinc-finger [PF13445.8, score=24.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.0]; PQQ-like domain [PF13360.8, score=19.9]; Ring finger domain [PF13639.8, score=19.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.0]; SMP-30/Gluconolactonase/LRE-like region [PF08450.14, score=18.3]} {Human: ENSG00000132274, TRIM22, tripartite motif containing 22, [Score=50.1, Expect=2e-06]} {Mouse: ENSMUSG00000021326, Trim27, tripartite motif-containing 27, [RH, Score=50.4, Expect=4e-06]} {Dmel: FBgn0265356, tn, thin, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_14782_0_2, dd_Smed_v6_14782_0_2, [Score=47.0, Expect=1e-05]} {RNA1509_46216} {RNA1310_15757, RNA1509_46216} {RNA1509_46216, RNA815_22710.1}
7. MligTC455_26282 437 9.11 Mlig455_022891

Neo: -

Age: -

CYP2E1 0.963 - - - - 0.963 - Mlig455_022891 {REF} {Length: 2781} {Pfam: Cytochrome P450 [PF00067.24, score=319.0]} {Human: ENSG00000130649, CYP2E1, cytochrome P450 family 2 subfamily E member 1, [Score=237, Expect=1e-71]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=234, Expect=1e-70]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=226, Expect=2e-67]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=243, Expect=8e-74]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=243, Expect=8e-74]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=243, Expect=9e-74]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=241, Expect=5e-73]; ENSMUSG00000040650, Cyp2b23, cytochrome P450, family 2, subfamily b, polypeptide 23, [Score=233, Expect=3e-70]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=233, Expect=7e-70]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=213, Expect=2e-62]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=217, Expect=2e-64]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [RH, Score=282, Expect=5e-89]} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1310_13284, RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462, RNA815_723}
8. MligTC455_51809 1156 24.09 Mlig455_029569, Mlig455_061527

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.569

Regeneration-downregulated BL: -2.620

Regeneration-depleted BL: -2.620

0.962 - - - - - 0.962

Mlig455_029569 {REF} {Length: 1842} {RNA1509_6500} {RNA1310_28860.1} {RNA815_9694}

Mlig455_061527 {REF} {Length: 1914} {RNA1509_6500} {RNA1310_28860.1} {RNA815_9694}
9. MligTC455_53919 394 8.2 Mlig455_022726

Neo: -

Age: -

RPGR 0.962 - - - - 0.962 - Mlig455_022726 {REF} {Length: 4679} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=168.1]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=127.2]} {Human: ENSG00000156313, RPGR, retinitis pigmentosa GTPase regulator, [Score=218, Expect=7e-58]} {Mouse: ENSMUSG00000031174, Rpgr, retinitis pigmentosa GTPase regulator, [Score=209, Expect=2e-55]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=130, Expect=2e-30]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=99.8, Expect=5e-21]} {Smed: dd_Smed_v6_2716_1_1, dd_Smed_v6_2716_1_1, [RH, Score=217, Expect=3e-60]} {RNA1509_21041} {RNA1310_3558.1, RNA1509_21041} {RNA1509_21041, RNA815_17415}
10. MligTC455_36424 451 9.4 Mlig455_003140, Mlig455_062750

Neo: -

Age: -

Regeneration-downregulated BL: -2.438

Regeneration-depleted BL: -2.438

FGA 0.961 - - - - - 0.961

Mlig455_003140 {REF} {Length: 3816} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=122.6]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=103, Expect=3e-22]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=102, Expect=1e-22]} {Mouse: ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=104, Expect=2e-23]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=100, Expect=1e-21]} {Dmel: FBgn0050280, CG30280, [Score=96.3, Expect=3e-22]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=108, Expect=9e-25]} {RNA1509_13704} {RNA1310_13723, RNA1509_13704} {RNA1509_13704, RNA815_2827.1}

Mlig455_062750 {REF} {Length: 3518} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=121.8]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=102, Expect=4e-22]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=101, Expect=3e-22]} {Mouse: ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=102, Expect=6e-23]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=100, Expect=2e-21]} {Dmel: FBgn0050280, CG30280, [Score=92.8, Expect=4e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=108, Expect=8e-25]} {RNA1509_13704} {RNA1310_13723} {RNA815_2827.1}
11. MligTC455_45161 29 0.6 Mlig455_027613

Neo: Irradiation

Age: -

WSCD2 0.96 - - - - 0.960 - Mlig455_027613 {REF} {Length: 1427} {Pfam: WSC domain [PF01822.21, score=56.9]; PAN domain [PF00024.28, score=21.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=54.3, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.6, Expect=4e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=61.2, Expect=8e-11]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.8, Expect=4e-08]} {RNA1509_29094} {RNA1310_36326} {RNA815_27950.1}
12. MligTC455_22819 5606 116.79 Mlig455_001625

Neo: -

Age: Down-Up-Up

DYNLRB2 0.956 - - - - 0.956 - Mlig455_001625 {REF} {Length: 631} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=87.5]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=3e-41]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=2e-41]} {Dmel: FBgn0024196, robl, roadblock, [Score=133, Expect=6e-42]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=97.8, Expect=4e-28]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=145, Expect=4e-47]} {RNA1509_6058, RNA1509_6997, RNA1509_7350} {RNA1310_20264.2, RNA1509_6058, RNA1509_6997, RNA1509_7350} {RNA1509_6058, RNA1509_6997, RNA1509_7350, RNA815_28390}
13. MligTC455_45987 1592 33.17 Mlig455_024379, Mlig455_024495

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.664

Region-specific R8: 3.405

Region-enriched R8: 3.716/0.00000
Region-enriched R7: 2.383/0.00000

Regeneration-depleted BL: -2.612
Regeneration-depleted TP: -2.566

PKDREJ 0.956 - - - - - 0.956

Mlig455_024379 {REF} {Length: 9101} {Pfam: PKD domain [PF18911.2, score=34.9]; PKD domain [PF00801.22, score=21.5]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58}

Mlig455_024495 {REF} {Length: 8484} {Pfam: Polycystin cation channel [PF08016.14, score=333.9]; PLAT/LH2 domain [PF01477.25, score=69.5]; PKD domain [PF18911.2, score=32.8]; Ion transport protein [PF00520.33, score=31.6]; PKD domain [PF00801.22, score=19.8]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [RH, Score=346, Expect=8e-95]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [RH, Score=327, Expect=4e-89]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [RH, Score=319, Expect=7e-87]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=167, Expect=3e-41]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=198, Expect=3e-52]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=592, Expect=9e-172]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58}
14. MligTC455_48974 124 2.58 Mlig455_055974

Neo: -

Age: -

Regeneration-upregulated BL: 5.064

Regeneration-enriched BL: 5.064

0.954 - - - - 0.954 - Mlig455_055974 {REF} {Length: 739} {NoTransDecoderORF} {RNA1310_50966} {RNA815_42094}
15. MligTC455_49573 617 12.86 Mlig455_022814

Neo: -

Age: -

CSK 0.954 - - - - - 0.954 Mlig455_022814 {REF} {Length: 4126} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=259.6]; Protein kinase domain [PF00069.27, score=122.4]; Transmembrane Fragile-X-F protein [PF10269.11, score=115.8]; SH2 domain [PF00017.26, score=56.9]} {Human: ENSG00000103653, CSK, C-terminal Src kinase, [RH, Score=342, Expect=1e-108]} {Mouse: ENSMUSG00000032312, Csk, c-src tyrosine kinase, [RH, Score=342, Expect=4e-109]} {Dmel: FBgn0262081, Csk, C-terminal Src kinase, [Score=308, Expect=6e-93]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=278, Expect=8e-84]} {Smed: dd_Smed_v6_6039_0_1, dd_Smed_v6_6039_0_1, [Score=289, Expect=2e-88]} {RNA1509_21196} {RNA1310_5299} {RNA815_7127.1}
16. MligTC455_17238 113 2.35 Mlig455_003562

Neo: -

Age: -

0.953 - - - - - 0.953 Mlig455_003562 {REF} {Length: 3318} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=92.5]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=121, Expect=9e-36]} {RNA1509_50848, RNA1509_53714} {RNA1310_39856, RNA1509_50848, RNA1509_53714} {RNA1509_50848, RNA1509_53714, RNA815_18155.1}
17. MligTC455_30998 353 7.36 Mlig455_041372, Mlig455_062743

Neo: -

Age: -

0.953 - - - - - 0.953

Mlig455_041372 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586}

Mlig455_062743 {REF} {Length: 223} {NoTransDecoderORF} {RNA1509_13580} {RNA1310_166} {RNA815_5586}
18. MligTC455_16213 641 13.35 Mlig455_042097

Neo: -

Age: -

Region-enriched R2: 2.338/0.01794

0.952 - - - - - 0.952 Mlig455_042097 {REF} {Length: 599} {TRANSSPLICED} {RNA1509_10288} {RNA1310_13980} {RNA815_5182.1}
19. MligTC455_24805 4322 90.04 Mlig455_065919

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.454

Region-enriched R7: 1.214/0.00538

Regeneration-downregulated BL: -1.666

Regeneration-depleted BL: -1.666

0.952 - - - - - 0.952 Mlig455_065919 {REF} {Length: 723} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534} {RNA1310_57754.2} {RNA815_27242}
20. MligTC455_54055 4842 100.87 Mlig455_036551, Mlig455_057816

Neo: -

Age: Down-Down-Up

Region-enriched R7: 1.124/0.01609

Regeneration-downregulated BL: -2.493

Regeneration-depleted BL: -2.493

0.952 - - - - - 0.952

Mlig455_036551 {REF} {Length: 741} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}

Mlig455_057816 {REF} {Length: 624} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}
21. MligTC455_20674 2347 48.9 Mlig455_011615

Neo: -

Age: -

Regeneration-downregulated BL: -1.557

Regeneration-depleted BL: -1.557

0.95 - - - - - 0.950 Mlig455_011615 {REF} {Length: 3475} {TRANSSPLICED} {RNA1509_1877, RNA1509_34283} {RNA1310_15601, RNA1509_34283} {RNA1509_34283, RNA815_2760}
22. MligTC455_50738 141 2.95 Mlig455_053327

Neo: -

Age: logFC(26M/2M)=0.489

MXI1 0.95 - - - - - 0.950 Mlig455_053327 {REF} {Length: 3210} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=40.0]} {Human: ENSG00000119950, MXI1, MAX interactor 1, dimerization protein, [Score=58.2, Expect=3e-09]} {Mouse: ENSMUSG00000001156, Mxd1, MAX dimerization protein 1, [Score=60.1, Expect=3e-10]; ENSMUSG00000025025, Mxi1, MAX interactor 1, dimerization protein, [Score=58.9, Expect=1e-09]} {Dmel: FBgn0023215, Mnt, [Score=50.4, Expect=8e-07]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=47.4, Expect=4e-06]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [Score=65.5, Expect=3e-12]} {RNA1509_21599} {RNA1310_15507} {RNA815_5411}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA