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Results for MligTC455_28208

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28208 284 5.92 Mlig455_021874

Neo: -

Age: -

 Mlig455_021874 {REF} {Length: 7459} {Smed: dd_Smed_v6_3783_0_1, dd_Smed_v6_3783_0_1, [RH, Score=428, Expect=5e-123]} {RNA1509_10937} {RNA1310_1042.1} {RNA815_1808}

Cumulative graph for MligTC455_28208

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.891 3.146 0.68601 1.00000
RegionR2 0.747 3.146 0.24340 0.61962
RegionR3 0.012 3.146 0.97827 1.00000
RegionR4 0.117 3.146 0.84672 1.00000
RegionR5 -0.2 3.146 0.70714 1.00000
RegionR6 0.311 3.146 0.55122 1.00000
RegionR7 0.627 3.146 0.35512 0.99117
RegionR8 -0.722 3.146 0.48987 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.346 3.146 0.61631 1.00000
RegenerationR2 0.325 3.146 0.39960 0.81434
RegenerationR3 0.244 3.146 0.63521 0.92275
RegenerationR4 -0.091 3.146 0.86178 1.00000
RegenerationR5 0.005 3.146 0.99500 1.00000
RegenerationR6 0.043 3.146 0.93180 1.00000
RegenerationBL -0.761 3.146 0.37925 0.74790
RegenerationTP -0.599 3.146 0.49573 0.89797


Genes with expression patterns similar to MligTC455_28208

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28208 284 5.92 Mlig455_021874

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_021874 {REF} {Length: 7459} {Smed: dd_Smed_v6_3783_0_1, dd_Smed_v6_3783_0_1, [RH, Score=428, Expect=5e-123]} {RNA1509_10937} {RNA1310_1042.1} {RNA815_1808}
2. MligTC455_28207 237 4.93 Mlig455_021871

Neo: -

Age: -

 4.858 0.993 0.979 0.989 0.995 - 0.902 Mlig455_021871 {REF} {Length: 5277} {Smed: dd_Smed_v6_3783_0_4, dd_Smed_v6_3783_0_4, [Score=266, Expect=5e-74]} {RNA1509_10937} {RNA1310_1042.1} {RNA815_1808}
3. MligTC455_22568 756 15.74 Mlig455_006710

Neo: -

Age: Up-Down-Down

 TRPM3 2.506 - - - 0.966 0.745 0.795 Mlig455_006710 {REF} {Length: 6137} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=107.2]; Ankyrin repeats (3 copies) [PF12796.9, score=92.9]; Ankyrin repeat [PF00023.32, score=63.3]; Ankyrin repeats (many copies) [PF13857.8, score=59.6]; Ankyrin repeat [PF13606.8, score=58.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=111, Expect=7e-24]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=111, Expect=5e-24]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=105, Expect=3e-22]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=64.3, Expect=6e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=120, Expect=3e-27]} {RNA1509_12598} {RNA1310_943.1} {RNA815_2516.1}
4. MligTC455_27908 252 5.24 Mlig455_005661, Mlig455_022242

Neo: -

Age: logFC(26M/2M)=0.351

 MAPK3 2.453 - - - 0.967 0.759 0.727

Mlig455_005661 {REF} {Length: 585} {TRANSSPLICED} {RNA1310_116326}

Mlig455_022242 {REF} {Length: 3697} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=86.4]} {Human: ENSG00000102882, MAPK3, mitogen-activated protein kinase 3, [Score=313, Expect=5e-108]; ENSG00000100030, MAPK1, mitogen-activated protein kinase 1, [Score=299, Expect=2e-101]} {Mouse: ENSMUSG00000063065, Mapk3, mitogen-activated protein kinase 3, [Score=314, Expect=4e-107]; ENSMUSG00000063358, Mapk1, mitogen-activated protein kinase 1, [Score=299, Expect=2e-101]} {Dmel: FBgn0003256, rl, rolled, [Score=285, Expect=1e-97]} {Celegans: WBGene00003401, mpk-1, Mitogen-activated protein kinase mpk-1, [Score=302, Expect=6e-103]} {Smed: dd_Smed_v6_9632_0_1, dd_Smed_v6_9632_0_1, [Score=309, Expect=7e-106]} {RNA1509_15152} {RNA1310_12000} {RNA815_16813}
5. MligTC455_29483 246 5.12 Mlig455_029965

Neo: -

Age: -

 ZNF316 2.437 - - 0.956 0.772 - 0.709 Mlig455_029965 {REF} {Length: 2716} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=47.1]; C2H2-type zinc finger [PF13894.8, score=43.5]; Zinc finger, C2H2 type [PF00096.28, score=41.6]} {Human: ENSG00000205903, ZNF316, zinc finger protein 316, [Score=97.4, Expect=9e-21]} {Mouse: ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=100, Expect=2e-22]; ENSMUSG00000046658, Zfp316, zinc finger protein 316, [Score=99.8, Expect=1e-21]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=92.4, Expect=2e-19]} {Celegans: WBGene00003845, odd-1, Protein odd-skipped-related 1, [Score=80.9, Expect=4e-17]} {Smed: dd_Smed_v6_9867_0_1, dd_Smed_v6_9867_0_1, [Score=75.9, Expect=1e-14]} {RNA1509_23895} {RNA1310_7507, RNA1509_23895} {RNA1509_23895, RNA815_3059}
6. MligTC455_06968 170 3.55 Mlig455_017040

Neo: -

Age: -

Region-enriched R2: 2.918/0.04464

 GPR179 1.855 - - 0.975 0.880 - - Mlig455_017040 {REF} {Length: 1289} {Human: ENSG00000276469, GPR179, G protein-coupled receptor 179, [Score=43.5, Expect=1e-05]; ENSG00000277399, GPR179, G protein-coupled receptor 179, [Score=43.5, Expect=1e-05]} {Mouse: ENSMUSG00000070337, Gpr179, G protein-coupled receptor 179, [Score=43.5, Expect=9e-06]} {Dmel: FBgn0051660, smog, [Score=80.5, Expect=6e-19]} {Celegans: WBGene00009558, F39B2.8, [Score=57.4, Expect=5e-11]} {Smed: dd_Smed_v6_8408_0_1, dd_Smed_v6_8408_0_1, [Score=70.9, Expect=7e-16]} {RNA1509_29274} {RNA1310_5195} {RNA815_2660}
7. MligTC455_02027 203 4.23 Mlig455_066314

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_066314 {REF} {Length: 3851} {Smed: dd_Smed_v6_18815_0_1, dd_Smed_v6_18815_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1509_42694} {RNA1310_23631} {RNA815_7941.1}
8. MligTC455_19002 593 12.36 Mlig455_042636

Neo: -

Age: -

 RAB4A 0.966 - - - 0.966 - - Mlig455_042636 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=192.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=107.5]; ADP-ribosylation factor family [PF00025.23, score=46.0]; 50S ribosome-binding GTPase [PF01926.25, score=22.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000168118, RAB4A, RAB4A, member RAS oncogene family, [RH, Score=315, Expect=1e-109]; ENSG00000167578, RAB4B, RAB4B, member RAS oncogene family, [RH, Score=310, Expect=8e-108]; ENSG00000171570, RAB4B-EGLN2, RAB4B-EGLN2 readthrough (NMD candidate), [RH, Score=310, Expect=8e-108]} {Mouse: ENSMUSG00000019478, Rab4a, RAB4A, member RAS oncogene family, [RH, Score=314, Expect=1e-109]; ENSMUSG00000053291, Rab4b, RAB4B, member RAS oncogene family, [RH, Score=310, Expect=5e-108]} {Dmel: FBgn0016701, Rab4, [RH, Score=308, Expect=1e-107]} {Celegans: WBGene00004276, rab-14, RAB family, [Score=247, Expect=1e-83]} {Smed: dd_Smed_v6_8106_0_1, dd_Smed_v6_8106_0_1, [RH, Score=257, Expect=2e-87]} {RNA1509_11473} {RNA1310_40054, RNA1509_11473} {RNA1509_11473, RNA815_18978}
9. MligTC455_46003 343 7.14 Mlig455_031613

Neo: -

Age: -

 HS3ST4 0.956 - - 0.956 - - - Mlig455_031613 {REF} {Length: 2875} {Pfam: Sulfotransferase domain [PF00685.29, score=127.2]; Sulfotransferase family [PF13469.8, score=64.3]} {Human: ENSG00000182601, HS3ST4, heparan sulfate-glucosamine 3-sulfotransferase 4, [RH, Score=290, Expect=7e-95]; ENSG00000276333, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [RH, Score=281, Expect=7e-93]; ENSG00000162040, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [RH, Score=281, Expect=7e-93]; ENSG00000153976, HS3ST3A1, heparan sulfate-glucosamine 3-sulfotransferase 3A1, [RH, Score=281, Expect=5e-92]; ENSG00000125430, HS3ST3B1, heparan sulfate-glucosamine 3-sulfotransferase 3B1, [RH, Score=280, Expect=9e-92]} {Mouse: ENSMUSG00000070407, Hs3st3b1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1, [RH, Score=290, Expect=1e-95]; ENSMUSG00000047759, Hs3st3a1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1, [RH, Score=289, Expect=3e-95]; ENSMUSG00000078591, Hs3st4, heparan sulfate (glucosamine) 3-O-sulfotransferase 4, [RH, Score=288, Expect=4e-94]; ENSMUSG00000039628, Hs3st6, heparan sulfate (glucosamine) 3-O-sulfotransferase 6, [RH, Score=284, Expect=4e-94]} {Dmel: FBgn0031005, Hs3st-B, Heparan sulfate 3-O sulfotransferase-B, [RH, Score=290, Expect=8e-96]} {Celegans: WBGene00044303, hst-3.2, Heparan SulphoTransferase, [RH, Score=238, Expect=8e-77]} {Smed: dd_Smed_v6_81402_0_1, dd_Smed_v6_81402_0_1, [Score=131, Expect=5e-37]} {RNA1509_17978} {RNA1310_10288, RNA1509_17978} {RNA1509_17978, RNA815_5964}
10. MligTC455_16121 35 0.72 Mlig455_015845

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_015845 {REF} {Length: 839} {RNA1509_6728} {RNA1310_56025} {RNA815_35015}
11. MligTC455_34888 610 12.71 Mlig455_059747

Neo: -

Age: Up-Down-Up

 PROM1 0.953 - - - 0.953 - - Mlig455_059747 {REF} {Length: 5570} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=235.9]; Predicted membrane protein (DUF2207) [PF09972.11, score=18.4]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=103, Expect=8e-22]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [RH, Score=144, Expect=9e-35]} {Smed: dd_Smed_v6_1386_0_1, dd_Smed_v6_1386_0_1, [RH, Score=158, Expect=5e-40]} {RNA1509_24546} {RNA1310_3366.1, RNA1509_24546} {RNA1509_24546, RNA815_11986.1}
12. MligTC455_03445 159 3.32 Mlig455_006850, Mlig455_044794, Mlig455_044818

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_006850 {REF} {Length: 2247} {Pfam: Transposase protein [PF12017.10, score=81.8]} {RNA1509_35100} {RNA1310_27151} {RNA815_38824}

Mlig455_044794 {REF} {Length: 3185} {Pfam: Transposase protein [PF12017.10, score=79.7]} {RNA1509_35100} {RNA1310_18231} {RNA815_38824}

Mlig455_044818 {REF} {Length: 3239} {Pfam: Transposase protein [PF12017.10, score=79.6]} {RNA1509_35100} {RNA1310_18231} {RNA815_38824}

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