TomoSeq data search

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Results for MligTC455_30310

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30310

35

0.72

Mlig455_064894

Neo: -

Age: logFC(26M/2M)=-0.316

MAP3K19

Mlig455_064894 {REF} {Length: 4973} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=251.2]; Ankyrin repeats (many copies) [PF13637.8, score=203.0]; Protein kinase domain [PF00069.27, score=179.1]; Ankyrin repeat [PF00023.32, score=143.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Ankyrin repeat [PF13606.8, score=116.2]; Ankyrin repeats (many copies) [PF13857.8, score=89.6]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=38.5]; L27_2 [PF09045.12, score=36.9]; Aft1 HRR domain [PF11787.10, score=33.7]; ABC1 atypical kinase-like domain [PF03109.18, score=28.9]; Fungal protein kinase [PF17667.3, score=23.6]; Bim protein N-terminus [PF06773.13, score=22.8]; Protein of unknown function (DUF3105) [PF11303.10, score=22.6]; Catalytic beta propeller domain of bacteriophage endosialidase [PF12217.10, score=22.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=154, Expect=6e-39]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=155, Expect=2e-39]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=142, Expect=9e-35]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=144, Expect=8e-38]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}

Cumulative graph for MligTC455_30310

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.495	1.164	0.99997	1.00000
RegionR2	0.209	1.164	1.00000	1.00000
RegionR3	-0.638	1.164	0.99993	1.00000
RegionR4	-0.034	1.164	0.99994	1.00000
RegionR5	-0.853	1.164	0.99989	1.00000
RegionR6	-0.548	1.164	0.99997	1.00000
RegionR7	0.207	1.164	0.99998	1.00000
RegionR8	0.163	1.164	0.99997	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.04	1.164	0.99999	1.00000
RegenerationR2	4.788	1.164	0.00028	0.02269
RegenerationR3	4.921	1.164	0.00789	0.16271
RegenerationR4	4.362	1.164	0.00994	0.15067
RegenerationR5	5.217	1.164	0.00055	0.03847
RegenerationR6	5.366	1.164	0.00338	0.06842
RegenerationBL	4.221	1.164	0.06076	0.28655
RegenerationTP	4.265	1.164	0.10736	0.50617

Genes with expression patterns similar to MligTC455_30310

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30310	35	0.72	Mlig455_064894	Neo: - Age: logFC(26M/2M)=-0.316	MAP3K19	3	-	-	-	1.000	1.000	1.000	Mlig455_064894 {REF} {Length: 4973} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=251.2]; Ankyrin repeats (many copies) [PF13637.8, score=203.0]; Protein kinase domain [PF00069.27, score=179.1]; Ankyrin repeat [PF00023.32, score=143.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Ankyrin repeat [PF13606.8, score=116.2]; Ankyrin repeats (many copies) [PF13857.8, score=89.6]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=38.5]; L27_2 [PF09045.12, score=36.9]; Aft1 HRR domain [PF11787.10, score=33.7]; ABC1 atypical kinase-like domain [PF03109.18, score=28.9]; Fungal protein kinase [PF17667.3, score=23.6]; Bim protein N-terminus [PF06773.13, score=22.8]; Protein of unknown function (DUF3105) [PF11303.10, score=22.6]; Catalytic beta propeller domain of bacteriophage endosialidase [PF12217.10, score=22.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=154, Expect=6e-39]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=155, Expect=2e-39]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=142, Expect=9e-35]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=144, Expect=8e-38]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
2.	MligTC455_30313	9	0.19	Mlig455_060053	Neo: - Age: -	ANKRD44	0.985	-	-	-	-	0.985	-	Mlig455_060053 {REF} {Length: 2604} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.0]; Ankyrin repeats (many copies) [PF13637.8, score=113.0]; Protein kinase domain [PF00069.27, score=87.0]; Ankyrin repeat [PF00023.32, score=84.0]; Ankyrin repeat [PF13606.8, score=74.4]; Ankyrin repeats (many copies) [PF13857.8, score=67.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=64.1]; L27_2 [PF09045.12, score=23.8]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=21.4]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=92.0, Expect=9e-19]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=64.7, Expect=2e-10]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=76.3, Expect=6e-14]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=78.2, Expect=7e-15]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
3.	MligTC455_47824	375	7.82	Mlig455_045590, Mlig455_045647	Neo: - Age: Up-Down-Down		0.977	-	-	-	-	0.977	-	Mlig455_045590 {REF} {Length: 6854} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=20.5]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574} {RNA1310_1258} {RNA815_816} Mlig455_045647 {REF} {Length: 7619} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=21.6]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574, RNA1509_19895} {RNA1310_1258, RNA1509_11574, RNA1509_19895} {RNA1509_11574, RNA1509_19895, RNA815_816}
4.	MligTC455_35840	39	0.81	Mlig455_029909, Mlig455_063972	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_029909 {REF} {Length: 2792} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_56135} {RNA1310_24780.1} {RNA815_41468} Mlig455_063972 {REF} {Length: 1073} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.4]}
5.	MligTC455_43290	126	2.63	Mlig455_024815, Mlig455_024894	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.478		0.967	-	-	-	-	0.967	-	Mlig455_024815 {REF} {Length: 1840} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=96.1]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582} Mlig455_024894 {REF} {Length: 2175} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=116.4]} {Smed: dd_Smed_v6_26469_0_1, dd_Smed_v6_26469_0_1, [Score=49.7, Expect=6e-07]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582}
6.	MligTC455_38577	53	1.1	Mlig455_039955, Mlig455_039969	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_039955 {REF} {Length: 1584} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576} Mlig455_039969 {REF} {Length: 462} {NoTransDecoderORF} {RNA1310_21615.2}
7.	MligTC455_30447	216	4.5	Mlig455_032507, Mlig455_068684	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_032507 {REF} {Length: 772} {Pfam: Phage integrase family [PF00589.24, score=25.2]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1} Mlig455_068684 {REF} {Length: 773} {Pfam: Phage integrase family [PF00589.24, score=24.0]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1}
8.	MligTC455_23939	10	0.2	Mlig455_036544	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.395	GRK6	0.955	-	-	-	-	0.955	-	Mlig455_036544 {REF} {Length: 3914} {Pfam: Protein kinase domain [PF00069.27, score=218.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.9]; Regulator of G protein signaling domain [PF00615.21, score=61.1]; Kinase-like [PF14531.8, score=23.8]; Fungal protein kinase [PF17667.3, score=17.7]} {Human: ENSG00000198055, GRK6, G protein-coupled receptor kinase 6, [RH, Score=665, Expect=0.0]; ENSG00000198873, GRK5, G protein-coupled receptor kinase 5, [RH, Score=662, Expect=0.0]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [RH, Score=633, Expect=0.0]} {Mouse: ENSMUSG00000003228, Grk5, G protein-coupled receptor kinase 5, [RH, Score=671, Expect=0.0]; ENSMUSG00000074886, Grk6, G protein-coupled receptor kinase 6, [RH, Score=661, Expect=0.0]} {Dmel: FBgn0261988, Gprk2, G protein-coupled receptor kinase 2, [Score=547, Expect=0.0]} {Celegans: WBGene00001708, grk-1, G protein-coupled receptor kinase 1, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_5929_0_1, dd_Smed_v6_5929_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_30276, RNA1509_5894} {RNA1310_5847.2, RNA1509_30276} {RNA1509_30276, RNA815_1576.1}
9.	MligTC455_00694	63	1.3	Mlig455_028833	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_028833 {REF} {Length: 243} {NoTransDecoderORF}
10.	MligTC455_44193	570	11.87	Mlig455_027505	Neo: - Age: Up-Down-Down	CHD6	0.954	-	-	-	-	0.954	-	Mlig455_027505 {REF} {Length: 10130} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=228.0]; Helicase conserved C-terminal domain [PF00271.33, score=65.9]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=61.0]; Type III restriction enzyme, res subunit [PF04851.17, score=30.8]} {Human: ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [RH, Score=1142, Expect=0.0]; ENSG00000177200, CHD9, chromodomain helicase DNA binding protein 9, [RH, Score=1142, Expect=0.0]; ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [RH, Score=1140, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [RH, Score=1138, Expect=0.0]} {Mouse: ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [RH, Score=1144, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [RH, Score=1141, Expect=0.0]; ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [RH, Score=1139, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [RH, Score=1139, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1096, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [RH, Score=985, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [RH, Score=654, Expect=0.0]} {RNA1509_13569, RNA1509_33310} {RNA1310_1751.2, RNA1509_33310} {RNA1509_33310, RNA815_2864.1}
11.	MligTC455_42937	128	2.66	Mlig455_043268	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.571	USH1G	0.951	-	-	-	-	-	0.951	Mlig455_043268 {REF} {Length: 4072} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.4]; Ankyrin repeats (many copies) [PF13637.8, score=51.5]; Ankyrin repeat [PF00023.32, score=40.4]; Ankyrin repeats (many copies) [PF13857.8, score=38.1]; Ankyrin repeat [PF13606.8, score=36.2]; SAM domain (Sterile alpha motif) [PF00536.32, score=30.9]; Pyoverdine/dityrosine biosynthesis protein [PF05141.14, score=18.1]} {Human: ENSG00000182040, USH1G, USH1 protein network component sans, [Score=201, Expect=6e-58]} {Mouse: ENSMUSG00000045288, Ush1g, USH1 protein network component sans, [Score=204, Expect=4e-59]} {Dmel: FBgn0033785, Sans, Scaffold protein containing ankyrin repeats and SAM domain, [RH, Score=149, Expect=7e-39]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=62.0, Expect=6e-10]} {Smed: dd_Smed_v6_68524_0_1, dd_Smed_v6_68524_0_1, [RH, Score=113, Expect=8e-29]} {RNA1509_17342} {RNA1310_11835.1} {RNA815_5253}
12.	MligTC455_45876	77	1.59	Mlig455_017599, Mlig455_058883	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_017599 {REF} {Length: 3586} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=27.3]} {Celegans: WBGene00019444, frpr-11, FMRFamide Peptide Receptor family, [Score=63.5, Expect=4e-11]} {RNA1310_90357} Mlig455_058883 {REF} {Length: 2226} {RNA1310_90357}

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