TomoSeq data search

Data search

Results for MligTC455_43290

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43290

126

2.63

Mlig455_024815, Mlig455_024894

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.478

Mlig455_024815 {REF} {Length: 1840} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=96.1]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582}

Mlig455_024894 {REF} {Length: 2175} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=116.4]} {Smed: dd_Smed_v6_26469_0_1, dd_Smed_v6_26469_0_1, [Score=49.7, Expect=6e-07]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582}

Cumulative graph for MligTC455_43290

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.126	2.295	1.00000	1.00000
RegionR2	1.458	2.295	0.24239	0.61832
RegionR3	0.619	2.295	0.53436	1.00000
RegionR4	2.066	2.295	0.09591	0.29885
RegionR5	0.18	2.295	0.69888	1.00000
RegionR6	1.584	2.295	0.14211	0.67558
RegionR7	2.075	2.295	0.08320	0.55552
RegionR8	-4.857	2.295	0.99979	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.741	2.295	0.99996	1.00000
RegenerationR2	0.309	2.295	0.59191	0.91147
RegenerationR3	0.043	2.295	0.96205	1.00000
RegenerationR4	-0.66	2.295	0.42574	0.82874
RegenerationR5	0.982	2.295	0.16911	0.59617
RegenerationR6	-0.052	2.295	0.94253	1.00000
RegenerationBL	1.28	2.295	0.41441	0.78338
RegenerationTP	-3.414	2.295	1.00000	1.00000

Genes with expression patterns similar to MligTC455_43290

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43290	126	2.63	Mlig455_024815, Mlig455_024894	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.478		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024815 {REF} {Length: 1840} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=96.1]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582} Mlig455_024894 {REF} {Length: 2175} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=116.4]} {Smed: dd_Smed_v6_26469_0_1, dd_Smed_v6_26469_0_1, [Score=49.7, Expect=6e-07]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582}
2.	MligTC455_30310	35	0.72	Mlig455_064894	Neo: - Age: logFC(26M/2M)=-0.316	MAP3K19	0.967	-	-	-	-	0.967	-	Mlig455_064894 {REF} {Length: 4973} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=251.2]; Ankyrin repeats (many copies) [PF13637.8, score=203.0]; Protein kinase domain [PF00069.27, score=179.1]; Ankyrin repeat [PF00023.32, score=143.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Ankyrin repeat [PF13606.8, score=116.2]; Ankyrin repeats (many copies) [PF13857.8, score=89.6]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=38.5]; L27_2 [PF09045.12, score=36.9]; Aft1 HRR domain [PF11787.10, score=33.7]; ABC1 atypical kinase-like domain [PF03109.18, score=28.9]; Fungal protein kinase [PF17667.3, score=23.6]; Bim protein N-terminus [PF06773.13, score=22.8]; Protein of unknown function (DUF3105) [PF11303.10, score=22.6]; Catalytic beta propeller domain of bacteriophage endosialidase [PF12217.10, score=22.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=154, Expect=6e-39]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=155, Expect=2e-39]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=142, Expect=9e-35]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=144, Expect=8e-38]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
3.	MligTC455_28984	21	0.45	Mlig455_063117	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_063117 {REF} {Length: 2812} {RNA1509_41553} {RNA1310_131485} {RNA815_51245}
4.	MligTC455_03359	17	0.35	Mlig455_037386	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_037386 {REF} {Length: 1323} {Pfam: Lectin C-type domain [PF00059.23, score=22.2]} {RNA1310_22051} {RNA815_28288}
5.	MligTC455_00694	63	1.3	Mlig455_028833	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_028833 {REF} {Length: 243} {NoTransDecoderORF}
6.	MligTC455_30313	9	0.19	Mlig455_060053	Neo: - Age: -	ANKRD44	0.957	-	-	-	-	0.957	-	Mlig455_060053 {REF} {Length: 2604} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.0]; Ankyrin repeats (many copies) [PF13637.8, score=113.0]; Protein kinase domain [PF00069.27, score=87.0]; Ankyrin repeat [PF00023.32, score=84.0]; Ankyrin repeat [PF13606.8, score=74.4]; Ankyrin repeats (many copies) [PF13857.8, score=67.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=64.1]; L27_2 [PF09045.12, score=23.8]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=21.4]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=92.0, Expect=9e-19]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=64.7, Expect=2e-10]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=76.3, Expect=6e-14]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=78.2, Expect=7e-15]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
7.	MligTC455_30447	216	4.5	Mlig455_032507, Mlig455_068684	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_032507 {REF} {Length: 772} {Pfam: Phage integrase family [PF00589.24, score=25.2]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1} Mlig455_068684 {REF} {Length: 773} {Pfam: Phage integrase family [PF00589.24, score=24.0]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1}
8.	MligTC455_41115	193	4.01	Mlig455_039552, Mlig455_051356	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_039552 {REF} {Length: 834} {NoTransDecoderORF} {RNA1310_134240} Mlig455_051356 {REF} {Length: 1229} {NoTransDecoderORF} {RNA1509_8078} {RNA1310_134240} {RNA815_8663}
9.	MligTC455_23939	10	0.2	Mlig455_036544	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.395	GRK6	0.954	-	-	-	-	0.954	-	Mlig455_036544 {REF} {Length: 3914} {Pfam: Protein kinase domain [PF00069.27, score=218.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.9]; Regulator of G protein signaling domain [PF00615.21, score=61.1]; Kinase-like [PF14531.8, score=23.8]; Fungal protein kinase [PF17667.3, score=17.7]} {Human: ENSG00000198055, GRK6, G protein-coupled receptor kinase 6, [RH, Score=665, Expect=0.0]; ENSG00000198873, GRK5, G protein-coupled receptor kinase 5, [RH, Score=662, Expect=0.0]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [RH, Score=633, Expect=0.0]} {Mouse: ENSMUSG00000003228, Grk5, G protein-coupled receptor kinase 5, [RH, Score=671, Expect=0.0]; ENSMUSG00000074886, Grk6, G protein-coupled receptor kinase 6, [RH, Score=661, Expect=0.0]} {Dmel: FBgn0261988, Gprk2, G protein-coupled receptor kinase 2, [Score=547, Expect=0.0]} {Celegans: WBGene00001708, grk-1, G protein-coupled receptor kinase 1, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_5929_0_1, dd_Smed_v6_5929_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_30276, RNA1509_5894} {RNA1310_5847.2, RNA1509_30276} {RNA1509_30276, RNA815_1576.1}
10.	MligTC455_35840	39	0.81	Mlig455_029909, Mlig455_063972	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_029909 {REF} {Length: 2792} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_56135} {RNA1310_24780.1} {RNA815_41468} Mlig455_063972 {REF} {Length: 1073} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.4]}
11.	MligTC455_42825	72	1.51	Mlig455_053406	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_053406 {REF} {Length: 1756} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_62493} {RNA815_38342}
12.	MligTC455_47824	375	7.82	Mlig455_045590, Mlig455_045647	Neo: - Age: Up-Down-Down		0.952	-	-	-	-	0.952	-	Mlig455_045590 {REF} {Length: 6854} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=20.5]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574} {RNA1310_1258} {RNA815_816} Mlig455_045647 {REF} {Length: 7619} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=21.6]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574, RNA1509_19895} {RNA1310_1258, RNA1509_11574, RNA1509_19895} {RNA1509_11574, RNA1509_19895, RNA815_816}

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