TomoSeq data search

Data search

Results for MligTC455_30313

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30313	9	0.19	Mlig455_060053	Neo: - Age: -	ANKRD44	Mlig455_060053 {REF} {Length: 2604} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.0]; Ankyrin repeats (many copies) [PF13637.8, score=113.0]; Protein kinase domain [PF00069.27, score=87.0]; Ankyrin repeat [PF00023.32, score=84.0]; Ankyrin repeat [PF13606.8, score=74.4]; Ankyrin repeats (many copies) [PF13857.8, score=67.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=64.1]; L27_2 [PF09045.12, score=23.8]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=21.4]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=92.0, Expect=9e-19]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=64.7, Expect=2e-10]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=76.3, Expect=6e-14]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=78.2, Expect=7e-15]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_30313

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.324	0.683	1.00000	1.00000
RegionR2	1.334	0.683	0.99993	1.00000
RegionR3	-0.399	0.683	0.99995	1.00000
RegionR4	-1.776	0.683	0.99976	1.00000
RegionR5	-1.347	0.683	0.99992	1.00000
RegionR6	-0.928	0.683	0.99995	1.00000
RegionR7	1.164	0.683	0.99998	1.00000
RegionR8	2.275	0.683	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.96	0.683	0.99998	1.00000
RegenerationR2	1.472	0.683	1.00000	1.00000
RegenerationR3	1.182	0.683	1.00000	1.00000
RegenerationR4	-0.34	0.683	0.99963	1.00000
RegenerationR5	1.611	0.683	0.99961	1.00000
RegenerationR6	2.532	0.683	0.99956	1.00000
RegenerationBL	-2.899	0.683	0.99991	1.00000
RegenerationTP	-1.644	0.683	0.99993	1.00000

Genes with expression patterns similar to MligTC455_30313

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30313	9	0.19	Mlig455_060053	Neo: - Age: -	ANKRD44	1	-	-	-	-	1.000	-	Mlig455_060053 {REF} {Length: 2604} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.0]; Ankyrin repeats (many copies) [PF13637.8, score=113.0]; Protein kinase domain [PF00069.27, score=87.0]; Ankyrin repeat [PF00023.32, score=84.0]; Ankyrin repeat [PF13606.8, score=74.4]; Ankyrin repeats (many copies) [PF13857.8, score=67.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=64.1]; L27_2 [PF09045.12, score=23.8]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=21.4]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=92.0, Expect=9e-19]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=64.7, Expect=2e-10]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=76.3, Expect=6e-14]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=78.2, Expect=7e-15]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
2.	MligTC455_30310	35	0.72	Mlig455_064894	Neo: - Age: logFC(26M/2M)=-0.316	MAP3K19	0.985	-	-	-	-	0.985	-	Mlig455_064894 {REF} {Length: 4973} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=251.2]; Ankyrin repeats (many copies) [PF13637.8, score=203.0]; Protein kinase domain [PF00069.27, score=179.1]; Ankyrin repeat [PF00023.32, score=143.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Ankyrin repeat [PF13606.8, score=116.2]; Ankyrin repeats (many copies) [PF13857.8, score=89.6]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=38.5]; L27_2 [PF09045.12, score=36.9]; Aft1 HRR domain [PF11787.10, score=33.7]; ABC1 atypical kinase-like domain [PF03109.18, score=28.9]; Fungal protein kinase [PF17667.3, score=23.6]; Bim protein N-terminus [PF06773.13, score=22.8]; Protein of unknown function (DUF3105) [PF11303.10, score=22.6]; Catalytic beta propeller domain of bacteriophage endosialidase [PF12217.10, score=22.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=154, Expect=6e-39]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=155, Expect=2e-39]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=142, Expect=9e-35]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=144, Expect=8e-38]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
3.	MligTC455_00694	63	1.3	Mlig455_028833	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_028833 {REF} {Length: 243} {NoTransDecoderORF}
4.	MligTC455_02544	9	0.19	Mlig455_035271	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_035271 {REF} {Length: 1211} {NoTransDecoderORF} {RNA1509_2609} {RNA1310_34122.1} {RNA815_6796.2}
5.	MligTC455_23939	10	0.2	Mlig455_036544	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.395	GRK6	0.963	-	-	-	-	0.963	-	Mlig455_036544 {REF} {Length: 3914} {Pfam: Protein kinase domain [PF00069.27, score=218.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.9]; Regulator of G protein signaling domain [PF00615.21, score=61.1]; Kinase-like [PF14531.8, score=23.8]; Fungal protein kinase [PF17667.3, score=17.7]} {Human: ENSG00000198055, GRK6, G protein-coupled receptor kinase 6, [RH, Score=665, Expect=0.0]; ENSG00000198873, GRK5, G protein-coupled receptor kinase 5, [RH, Score=662, Expect=0.0]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [RH, Score=633, Expect=0.0]} {Mouse: ENSMUSG00000003228, Grk5, G protein-coupled receptor kinase 5, [RH, Score=671, Expect=0.0]; ENSMUSG00000074886, Grk6, G protein-coupled receptor kinase 6, [RH, Score=661, Expect=0.0]} {Dmel: FBgn0261988, Gprk2, G protein-coupled receptor kinase 2, [Score=547, Expect=0.0]} {Celegans: WBGene00001708, grk-1, G protein-coupled receptor kinase 1, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_5929_0_1, dd_Smed_v6_5929_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_30276, RNA1509_5894} {RNA1310_5847.2, RNA1509_30276} {RNA1509_30276, RNA815_1576.1}
6.	MligTC455_39857	27	0.55	Mlig455_037127	Neo: - Age: Down-Down-Down	NECAB1	0.963	-	-	-	-	0.963	-	Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367}
7.	MligTC455_50509	38	0.79	Mlig455_024809	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_024809 {REF} {Length: 2779} {RNA1310_44589} {RNA815_56600}
8.	MligTC455_47824	375	7.82	Mlig455_045590, Mlig455_045647	Neo: - Age: Up-Down-Down		0.96	-	-	-	-	0.960	-	Mlig455_045590 {REF} {Length: 6854} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=20.5]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574} {RNA1310_1258} {RNA815_816} Mlig455_045647 {REF} {Length: 7619} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=21.6]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574, RNA1509_19895} {RNA1310_1258, RNA1509_11574, RNA1509_19895} {RNA1509_11574, RNA1509_19895, RNA815_816}
9.	MligTC455_28984	21	0.45	Mlig455_063117	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_063117 {REF} {Length: 2812} {RNA1509_41553} {RNA1310_131485} {RNA815_51245}
10.	MligTC455_41115	193	4.01	Mlig455_039552, Mlig455_051356	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_039552 {REF} {Length: 834} {NoTransDecoderORF} {RNA1310_134240} Mlig455_051356 {REF} {Length: 1229} {NoTransDecoderORF} {RNA1509_8078} {RNA1310_134240} {RNA815_8663}
11.	MligTC455_49628	82	1.7	Mlig455_043447	Neo: - Age: -	SLC16A12	0.958	-	-	-	-	0.958	-	Mlig455_043447 {REF} {Length: 5313} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=105.0]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=114, Expect=5e-26]; ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [Score=114, Expect=5e-26]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=118, Expect=1e-27]} {Dmel: FBgn0035173, CG13907, [Score=336, Expect=9e-103]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=295, Expect=8e-89]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [RH, Score=409, Expect=2e-128]} {RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1310_5615, RNA1509_13827, RNA1509_17254, RNA1509_27907} {RNA1509_13827, RNA1509_17254, RNA1509_27907, RNA815_8392}
12.	MligTC455_06565	6	0.13	Mlig455_067505	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_067505 {REF} {Length: 825} {NoTransDecoderORF} {RNA1509_13622} {RNA1310_7243} {RNA815_62726}
13.	MligTC455_38577	53	1.1	Mlig455_039955, Mlig455_039969	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_039955 {REF} {Length: 1584} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576} Mlig455_039969 {REF} {Length: 462} {NoTransDecoderORF} {RNA1310_21615.2}
14.	MligTC455_43290	126	2.63	Mlig455_024815, Mlig455_024894	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.478		0.957	-	-	-	-	0.957	-	Mlig455_024815 {REF} {Length: 1840} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=96.1]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582} Mlig455_024894 {REF} {Length: 2175} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=116.4]} {Smed: dd_Smed_v6_26469_0_1, dd_Smed_v6_26469_0_1, [Score=49.7, Expect=6e-07]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582}
15.	MligTC455_35840	39	0.81	Mlig455_029909, Mlig455_063972	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_029909 {REF} {Length: 2792} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_56135} {RNA1310_24780.1} {RNA815_41468} Mlig455_063972 {REF} {Length: 1073} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.4]}
16.	MligTC455_45708	13	0.27	Mlig455_009331	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_009331 {REF} {Length: 3871}
17.	MligTC455_19373	162	3.38	Mlig455_040143	Neo: - Age: -	CFDP1	0.953	-	-	-	-	0.953	-	Mlig455_040143 {REF} {Length: 2641} {TRANSSPLICED} {Pfam: Bucentaur or craniofacial development [PF07572.14, score=96.6]} {Human: ENSG00000153774, CFDP1, craniofacial development protein 1, [RH, Score=123, Expect=5e-32]} {Mouse: ENSMUSG00000031954, Cfdp1, craniofacial development protein 1, [RH, Score=122, Expect=8e-32]} {Dmel: FBgn0267398, Yeti, [RH, Score=89.7, Expect=1e-20]} {Celegans: WBGene00009565, F39H11.1, [RH, Score=75.1, Expect=1e-15]} {Smed: dd_Smed_v6_2321_0_1, dd_Smed_v6_2321_0_1, [RH, Score=87.8, Expect=2e-20]} {RNA1509_18690, RNA1509_30032, RNA1509_31216} {RNA1310_29020, RNA1509_18690, RNA1509_31216} {RNA1509_18690, RNA1509_31216, RNA815_14432.1}
18.	MligTC455_44193	570	11.87	Mlig455_027505	Neo: - Age: Up-Down-Down	CHD6	0.953	-	-	-	-	0.953	-	Mlig455_027505 {REF} {Length: 10130} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=228.0]; Helicase conserved C-terminal domain [PF00271.33, score=65.9]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=61.0]; Type III restriction enzyme, res subunit [PF04851.17, score=30.8]} {Human: ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [RH, Score=1142, Expect=0.0]; ENSG00000177200, CHD9, chromodomain helicase DNA binding protein 9, [RH, Score=1142, Expect=0.0]; ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [RH, Score=1140, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [RH, Score=1138, Expect=0.0]} {Mouse: ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [RH, Score=1144, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [RH, Score=1141, Expect=0.0]; ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [RH, Score=1139, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [RH, Score=1139, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1096, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [RH, Score=985, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [RH, Score=654, Expect=0.0]} {RNA1509_13569, RNA1509_33310} {RNA1310_1751.2, RNA1509_33310} {RNA1509_33310, RNA815_2864.1}
19.	MligTC455_24032	164	3.42	Mlig455_001002	Neo: - Age: Up-Down-Down	DSCAML1	0.952	-	-	-	-	0.952	-	Mlig455_001002 {REF} {Length: 8646} {Pfam: Immunoglobulin domain [PF13927.8, score=141.9]; Fibronectin type III domain [PF00041.23, score=127.5]; Immunoglobulin I-set domain [PF07679.18, score=114.8]; Immunoglobulin domain [PF13895.8, score=78.5]; Immunoglobulin domain [PF00047.27, score=75.8]; Immunoglobulin V-set domain [PF07686.19, score=48.9]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [Score=140, Expect=3e-32]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [Score=138, Expect=8e-32]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=170, Expect=9e-42]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=86.3, Expect=3e-16]} {Smed: dd_Smed_v6_3024_0_2, dd_Smed_v6_3024_0_2, [Score=287, Expect=2e-77]} {RNA1509_57897, RNA1509_9070} {RNA1310_454.1, RNA1509_57897, RNA1509_9070} {RNA1509_57897, RNA1509_9070, RNA815_227}
20.	MligTC455_49094	59	1.22	Mlig455_065396	Neo: - Age: -	RERGL	0.951	-	-	-	-	0.951	-	Mlig455_065396 {REF} {Length: 1449} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=61.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=25.4]} {Human: ENSG00000111404, RERGL, RERG like, [Score=80.5, Expect=7e-18]; ENSG00000134533, RERG, RAS like estrogen regulated growth inhibitor, [Score=80.1, Expect=7e-18]} {Mouse: ENSMUSG00000092164, Rergl, RERG/RAS-like, [Score=84.7, Expect=1e-19]} {Dmel: FBgn0035711, CG8519, [Score=69.3, Expect=4e-14]} {Celegans: WBGene00004309, rap-3, RAP homolog (Vertebrate Rap GTPase family), [Score=59.3, Expect=1e-10]} {Smed: dd_Smed_v6_7273_0_1, dd_Smed_v6_7273_0_1, [Score=80.1, Expect=3e-18]} {RNA1509_41924} {RNA1310_34154} {RNA815_43516}