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Results for MligTC455_37509

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37509 85 1.77 Mlig455_048299

Neo: -

Age: -

Region-enriched R2: 5.741/0.03019

 SALL4 Mlig455_048299 {REF} {Length: 1020} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=33.5]; C2H2-type zinc finger [PF13894.8, score=31.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.1]; Zinc-finger double domain [PF13465.8, score=26.1]} {Human: ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=80.9, Expect=6e-17]; ENSG00000256463, SALL3, spalt like transcription factor 3, [Score=79.0, Expect=3e-16]; ENSG00000277015, SALL3, spalt like transcription factor 3, [Score=79.0, Expect=3e-16]; ENSG00000263310, SALL3, spalt like transcription factor 3, [Score=78.6, Expect=4e-16]; ENSG00000103449, SALL1, spalt like transcription factor 1, [Score=78.2, Expect=7e-16]} {Mouse: ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=80.9, Expect=5e-17]; ENSMUSG00000024565, Sall3, spalt like transcription factor 3, [Score=79.0, Expect=2e-16]; ENSMUSG00000031665, Sall1, spalt like transcription factor 1, [Score=77.8, Expect=6e-16]} {Dmel: FBgn0261648, salm, spalt major, [Score=80.5, Expect=4e-17]} {Celegans: WBGene00004773, sem-4, SEM-4 long form, [Score=81.3, Expect=2e-17]} {Smed: dd_Smed_v6_14176_0_1, dd_Smed_v6_14176_0_1, [Score=94.7, Expect=3e-22]} {RNA1509_34185} {RNA1310_7579} {RNA815_11290}

Cumulative graph for MligTC455_37509

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.092 1.653 0.99966 1.00000
RegionR2 5.741 1.653 0.00162 0.03019
RegionR3 1.248 1.653 0.99979 1.00000
RegionR4 -0.969 1.653 0.99980 1.00000
RegionR5 2.376 1.653 0.16345 0.42720
RegionR6 1.246 1.653 0.68177 1.00000
RegionR7 -0.366 1.653 0.99982 1.00000
RegionR8 -3.185 1.653 0.99976 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.918 1.653 1.00000 1.00000
RegenerationR2 1.52 1.653 0.09817 0.49642
RegenerationR3 4.877 1.653 0.00317 0.10005
RegenerationR4 4.358 1.653 0.00343 0.07861
RegenerationR5 3.254 1.653 0.00811 0.16375
RegenerationR6 5.273 1.653 0.00173 0.04653
RegenerationBL 5.397 1.653 0.00671 0.07952
RegenerationTP 6.235 1.653 0.00937 0.16358


Genes with expression patterns similar to MligTC455_37509

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37509 85 1.77 Mlig455_048299

Neo: -

Age: -

Region-enriched R2: 5.741/0.03019

 SALL4 4 - - 1.000 1.000 1.000 1.000 Mlig455_048299 {REF} {Length: 1020} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=33.5]; C2H2-type zinc finger [PF13894.8, score=31.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.1]; Zinc-finger double domain [PF13465.8, score=26.1]} {Human: ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=80.9, Expect=6e-17]; ENSG00000256463, SALL3, spalt like transcription factor 3, [Score=79.0, Expect=3e-16]; ENSG00000277015, SALL3, spalt like transcription factor 3, [Score=79.0, Expect=3e-16]; ENSG00000263310, SALL3, spalt like transcription factor 3, [Score=78.6, Expect=4e-16]; ENSG00000103449, SALL1, spalt like transcription factor 1, [Score=78.2, Expect=7e-16]} {Mouse: ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=80.9, Expect=5e-17]; ENSMUSG00000024565, Sall3, spalt like transcription factor 3, [Score=79.0, Expect=2e-16]; ENSMUSG00000031665, Sall1, spalt like transcription factor 1, [Score=77.8, Expect=6e-16]} {Dmel: FBgn0261648, salm, spalt major, [Score=80.5, Expect=4e-17]} {Celegans: WBGene00004773, sem-4, SEM-4 long form, [Score=81.3, Expect=2e-17]} {Smed: dd_Smed_v6_14176_0_1, dd_Smed_v6_14176_0_1, [Score=94.7, Expect=3e-22]} {RNA1509_34185} {RNA1310_7579} {RNA815_11290}
2. MligTC455_27859 118 2.45 Mlig455_066646

Neo: -

Age: Up-Down-Up

 NUDCD1 2.67 - - - 0.909 0.969 0.792 Mlig455_066646 {REF} {Length: 4075} {TRANSSPLICED} {Pfam: CS domain [PF04969.18, score=25.8]} {Human: ENSG00000120526, NUDCD1, NudC domain containing 1, [Score=166, Expect=1e-44]} {Mouse: ENSMUSG00000038736, Nudcd1, NudC domain containing 1, [Score=157, Expect=8e-42]} {Dmel: FBgn0030342, CG10347, [Score=61.6, Expect=7e-10]} {RNA1509_9333} {RNA1310_9303.1} {RNA815_4347}
3. MligTC455_29260 139 2.9 Mlig455_017645

Neo: -

Age: logFC(26M/2M)=0.941

 2.5 - - 0.742 - 0.983 0.775 Mlig455_017645 {REF} {Length: 9122} {Pfam: Zinc knuckle [PF00098.25, score=34.2]} {Celegans: WBGene00017210, F07E5.5, [Score=53.5, Expect=3e-07]} {RNA1509_9188} {RNA1310_234.1} {RNA815_23.1}
4. MligTC455_08796 92 1.91 Mlig455_005779

Neo: -

Age: Up-Down-Up

 1.887 - - - - 0.967 0.920 Mlig455_005779 {REF} {Length: 406} {NoTransDecoderORF} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
5. MligTC455_28329 89 1.86 Mlig455_031656

Neo: -

Age: -

 1.826 - - - - 0.873 0.953 Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
6. MligTC455_26668 406 8.46 Mlig455_011365

Neo: -

Age: -

Regeneration-upregulated BL: 6.270

Regeneration-enriched BL: 6.270

 1.799 - - - - 0.967 0.832 Mlig455_011365 {REF} {Length: 3699} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=20.7]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857}
7. MligTC455_27067 130 2.7 Mlig455_009534

Neo: -

Age: -

Regeneration-upregulated BL: 5.799

Regeneration-enriched BL: 5.799

 1.744 - - 0.956 - - 0.788 Mlig455_009534 {REF} {Length: 1118} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
8. MligTC455_37629 75 1.56 Mlig455_051157

Neo: -

Age: -

 1.725 - - - - 0.979 0.746 Mlig455_051157 {REF} {Length: 1499} {Pfam: Integrase core domain [PF00665.28, score=31.3]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=55.8, Expect=8e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
9. MligTC455_13875 92 1.92 Mlig455_025418

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_025418 {REF} {Length: 631} {NoTransDecoderORF}
10. MligTC455_10504 104 2.17 Mlig455_068312

Neo: -

Age: -

 0.969 - - 0.969 - - - Mlig455_068312 {REF} {Length: 392} {NoTransDecoderORF} {RNA1509_34762} {RNA1310_10783} {RNA815_26766}
11. MligTC455_36065 889 18.53 Mlig455_014334, Mlig455_020356, Mlig455_031898, Mlig455_036772, Mlig455_060660

Neo: -

Age: -

 0.965 - - - - 0.965 -

Mlig455_014334 {REF} {Length: 1229} {Pfam: Integrase core domain [PF00665.28, score=28.6]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_020356 {REF} {Length: 6131} {Celegans: WBGene00016348, C33E10.6, [RH, Score=286, Expect=1e-84]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=300, Expect=3e-90]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}

Mlig455_031898 {REF} {Length: 1129} {Pfam: Integrase core domain [PF00665.28, score=21.1]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=54.3, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_036772 {REF} {Length: 1339} {Pfam: Integrase core domain [PF00665.28, score=34.8]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=57.4, Expect=4e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_060660 {REF} {Length: 921} {Pfam: Integrase core domain [PF00665.28, score=33.9]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=56.6, Expect=6e-10]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_23595}
12. MligTC455_11511 17 0.35 Mlig455_066661

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_066661 {REF} {Length: 370} {Pfam: Special lobe-specific silk protein SSP160 [PF06933.13, score=18.8]} {RNA1509_53857} {RNA1310_97631} {RNA815_39617}
13. MligTC455_43501 42 0.88 Mlig455_037513

Neo: -

Age: -

Regeneration-downregulated R2: -3.018

Regeneration-depleted R2: -3.018

 0.961 - - 0.961 - - - Mlig455_037513 {REF} {Length: 1296} {Pfam: Cell-cycle alteration and expression-elevated protein in tumour [PF16566.7, score=21.6]; Centrosome localisation domain of Cep57 [PF14073.8, score=19.1]} {RNA1509_30182} {RNA1310_25153} {RNA815_26901}
14. MligTC455_27069 73 1.53 Mlig455_069952

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_069952 {REF} {Length: 529} {RNA1509_59553} {RNA1310_127391} {RNA815_64986}
15. MligTC455_43303 180 3.75 Mlig455_001813

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.918

 0.957 - - - - 0.957 - Mlig455_001813 {REF} {Length: 2537} {RNA1509_14667} {RNA1310_23413} {RNA815_13658}
16. MligTC455_28977 735 15.3 Mlig455_000572, Mlig455_003191, Mlig455_003290, Mlig455_016496, Mlig455_022341, Mlig455_023424, Mlig455_023450, Mlig455_032331

Neo: -

Age: -

Region-enriched R4: 4.319/0.02249

 0.954 - - - - 0.954 -

Mlig455_000572 {REF} {Length: 460} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003191 {REF} {Length: 879} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003290 {REF} {Length: 984} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_016496 {REF} {Length: 959} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_022341 {REF} {Length: 1260} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023424 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023450 {REF} {Length: 1739} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_032331 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}
17. MligTC455_23771 562 11.71 Mlig455_001066

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.497

Regeneration-downregulated R6: -1.893

Regeneration-depleted R6: -1.893

 0.953 - - - - 0.953 - Mlig455_001066 {REF} {Length: 2450} {RNA1509_11279, RNA1509_32795, RNA1509_36849} {RNA1310_11231, RNA1509_11279, RNA1509_32795, RNA1509_36849} {RNA1509_11279, RNA1509_32795, RNA1509_36849, RNA815_3393}
18. MligTC455_29932 1986 41.38 Mlig455_001199, Mlig455_005142, Mlig455_020531, Mlig455_026534, Mlig455_026702, Mlig455_030169, Mlig455_032446, Mlig455_042854, Mlig455_049560, Mlig455_060694, Mlig455_069001, Mlig455_070764

Neo: -

Age: Up-Down-Up

Region-enriched R7: 2.070/0.01902

 0.952 - - - - 0.952 -

Mlig455_001199 {REF} {Length: 3263} {tRNA: Val(CAC),pseudo, score=24.9} {RNA1509_18349} {RNA1310_29429.1} {RNA815_17990}

Mlig455_005142 {REF} {Length: 6998} {tRNA: Val(CAC),pseudo, score=24.9} {RNA1509_20096} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_020531 {REF} {Length: 5762} {tRNA: Val(CAC),pseudo, score=24.9} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_026534 {REF} {Length: 1135} {Pfam: Integrase core domain [PF00665.28, score=28.1]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=59.3, Expect=8e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_026702 {REF} {Length: 2050} {tRNA: Val(CAC),pseudo, score=24.9} {RNA1509_18349} {RNA1310_29429.1} {RNA815_17990}

Mlig455_030169 {REF} {Length: 853} {Pfam: Integrase core domain [PF00665.28, score=27.1]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=45.4, Expect=4e-06]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_032446 {REF} {Length: 1256} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=24.9} {RNA1509_18349} {RNA1310_73557} {RNA815_16852}

Mlig455_042854 {REF} {Length: 957} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=28.6} {RNA1509_18349} {RNA1310_73557} {RNA815_16852}

Mlig455_049560 {REF} {Length: 564} {Pfam: Integrase core domain [PF00665.28, score=28.3]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_060694 {REF} {Length: 1136} {Pfam: Integrase core domain [PF00665.28, score=28.5]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_069001 {REF} {Length: 997} {Pfam: Integrase core domain [PF00665.28, score=28.3]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_070764 {REF} {Length: 1137} {Pfam: Integrase core domain [PF00665.28, score=28.3]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
19. MligTC455_44329 510 10.62 Mlig455_026184, Mlig455_026199

Neo: -

Age: -

Region-specific R2: 5.127

Region-enriched R2: 4.824/0.00000
Region-enriched R5: 2.073/0.03126

 0.951 - - 0.951 - - -

Mlig455_026184 {REF} {Length: 724} {RNA1509_29216, RNA1509_32102} {RNA1310_60068, RNA1509_29216} {RNA1509_29216, RNA815_37486}

Mlig455_026199 {REF} {Length: 531} {RNA1509_32102} {RNA1310_60068} {RNA815_37486}
20. MligTC455_30834 130 2.72 Mlig455_058052

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.183

 HDAC11 0.95 - - - - 0.950 - Mlig455_058052 {REF} {Length: 12455} {Pfam: Histone deacetylase domain [PF00850.21, score=140.8]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=310, Expect=8e-103]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=308, Expect=6e-102]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [Score=263, Expect=2e-84]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [Score=225, Expect=3e-70]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=248, Expect=3e-79]} {RNA1509_12648} {RNA1310_37725.1} {RNA815_2054.1}

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