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Results for MligTC455_36686

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36686 47 0.97 Mlig455_056861

Neo: -

Age: -

 Mlig455_056861 {REF} {Length: 6184} {RNA1509_14690} {RNA1310_36097} {RNA815_32539}

Cumulative graph for MligTC455_36686

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.923 1.344 0.99956 1.00000
RegionR2 0.029 1.344 0.69796 1.00000
RegionR3 0.827 1.344 0.50508 0.99686
RegionR4 2.652 1.344 0.17333 0.43839
RegionR5 0.837 1.344 0.56457 0.92351
RegionR6 -0.961 1.344 0.94275 1.00000
RegionR7 -1.558 1.344 0.99976 1.00000
RegionR8 -0.904 1.344 0.99971 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.606 1.344 1.00000 1.00000
RegenerationR2 2.308 1.344 0.00940 0.15514
RegenerationR3 1.269 1.344 0.37101 0.78440
RegenerationR4 0.619 1.344 0.60415 0.91498
RegenerationR5 1.849 1.344 0.13511 0.54379
RegenerationR6 3.245 1.344 0.06033 0.30852
RegenerationBL 3.304 1.344 0.09925 0.37024
RegenerationTP 2.401 1.344 0.38060 0.81604


Genes with expression patterns similar to MligTC455_36686

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36686 47 0.97 Mlig455_056861

Neo: -

Age: -

 4 - - 1.000 1.000 1.000 1.000 Mlig455_056861 {REF} {Length: 6184} {RNA1509_14690} {RNA1310_36097} {RNA815_32539}
2. MligTC455_38178 19 0.39 Mlig455_025460

Neo: -

Age: -

 SIX4 1.831 - - 0.957 - 0.874 - Mlig455_025460 {REF} {Length: 2329} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=141.7]; Homeodomain [PF00046.31, score=57.9]; Homeobox KN domain [PF05920.13, score=40.9]} {Human: ENSG00000100625, SIX4, SIX homeobox 4, [RH, Score=271, Expect=6e-84]} {Mouse: ENSMUSG00000034460, Six4, sine oculis-related homeobox 4, [RH, Score=270, Expect=1e-83]} {Dmel: FBgn0027364, Six4, [RH, Score=254, Expect=2e-81]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [Score=202, Expect=3e-63]} {Smed: dd_Smed_v6_37930_0_1, dd_Smed_v6_37930_0_1, [RH, Score=244, Expect=7e-79]}
3. MligTC455_37314 28 0.59 Mlig455_020645

Neo: -

Age: -

 CALM2 1.829 - - - - 0.950 0.879 Mlig455_020645 {REF} {Length: 1006} {Pfam: EF-hand domain pair [PF13499.8, score=22.0]; EF-hand domain [PF14658.8, score=19.6]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=65.9, Expect=3e-13]; ENSG00000198668, CALM1, calmodulin 1, [Score=65.9, Expect=3e-13]; ENSG00000160014, CALM3, calmodulin 3, [Score=65.9, Expect=3e-13]; ENSG00000178363, CALML3, calmodulin like 3, [Score=65.1, Expect=6e-13]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=66.6, Expect=3e-13]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=65.9, Expect=2e-13]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=65.9, Expect=2e-13]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=67.8, Expect=3e-14]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_5491_0_1, dd_Smed_v6_5491_0_1, [Score=109, Expect=5e-30]} {RNA1310_33365} {RNA815_27013}
4. MligTC455_12808 42 0.87 Mlig455_037582

Neo: -

Age: -

Region-enriched R4: 3.576/0.00003

 1.706 - - - 0.751 0.955 - Mlig455_037582 {REF} {Length: 4205} {RNA1509_14533} {RNA1310_10263.1} {RNA815_2693.1}
5. MligTC455_09518 5 0.1 Mlig455_016254

Neo: -

Age: -

 0.977 - - 0.977 - - - Mlig455_016254 {REF} {Length: 629} {NoTransDecoderORF} {RNA1310_114380} {RNA815_51822}
6. MligTC455_18705 245 5.1 Mlig455_049103

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.691

Region-enriched R2: 3.386/0.00031

 0.974 - - - - - 0.974 Mlig455_049103 {REF} {Length: 2620} {RNA1509_38020} {RNA1310_26284.1} {RNA815_13453}
7. MligTC455_41708 14 0.29 Mlig455_037421

Neo: -

Age: -

Region-enriched R2: 6.970/0.00433
Region-enriched R3: 4.290/0.02194
Region-enriched R5: 2.659/0.02282

 0.967 - - 0.967 - - - Mlig455_037421 {REF} {Length: 1393} {Pfam: Lectin C-type domain [PF00059.23, score=23.1]} {RNA1310_22051} {RNA815_40566}
8. MligTC455_45953 19 0.4 Mlig455_052538

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_052538 {REF} {Length: 308} {NoTransDecoderORF} {RNA1310_34356} {RNA815_20864}
9. MligTC455_04417 8 0.18 Mlig455_014866

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.547

 0.963 - - - - 0.963 - Mlig455_014866 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=123.6]} {RNA1509_7353} {RNA1310_1123.1} {RNA815_252.1}
10. MligTC455_22834 767 15.98 Mlig455_003372, Mlig455_012791, Mlig455_031654, Mlig455_031907, Mlig455_043709, Mlig455_054104

Neo: -

Age: -

Region-enriched R8: 1.637/0.02042
Region-enriched R4: 1.591/0.00837

 SLC13A3 0.958 - - - 0.958 - -

Mlig455_003372 {REF} {Length: 778} {TRANSSPLICED} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Mlig455_012791 {REF} {Length: 3446} {TRANSSPLICED} {Pfam: SOSS complex subunit C [PF15925.7, score=37.2]} {Dmel: FBgn0259720, CG42374, [RH, Score=41.6, Expect=8e-06]} {RNA1509_13897} {RNA1310_16789} {RNA815_18436}

Mlig455_031654 {REF} {Length: 1005} {TRANSSPLICED} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Mlig455_031907 {REF} {Length: 5013} {Pfam: Sodium:sulfate symporter transmembrane region [PF00939.21, score=178.2]; Citrate transporter [PF03600.18, score=53.7]} {Human: ENSG00000158296, SLC13A3, solute carrier family 13 member 3, [Score=268, Expect=4e-83]} {Mouse: ENSMUSG00000018459, Slc13a3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3, [Score=252, Expect=3e-77]} {Dmel: FBgn0036816, Indy, I'm not dead yet, [Score=204, Expect=1e-59]} {Celegans: WBGene00003517, nac-1, Sodium-dependent low-affinity dicarboxylate transporter 1, [Score=215, Expect=8e-64]} {Smed: dd_Smed_v6_12964_0_2, dd_Smed_v6_12964_0_2, [RH, Score=237, Expect=4e-74]} {RNA1509_47535} {RNA1310_11790} {RNA815_11593}

Mlig455_043709 {REF} {Length: 462} {NoTransDecoderORF} {RNA1509_57421} {RNA1310_25119} {RNA815_11593}

Mlig455_054104 {REF} {Length: 999} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}
11. MligTC455_11263 356 7.41 Mlig455_038311, Mlig455_054570, Mlig455_065452

Neo: -

Age: Down-Up-Down

 GIPC3 0.957 - - - 0.957 - -

Mlig455_038311 {REF} {Length: 2708} {TRANSSPLICED} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=64.3, Expect=5e-10]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [Score=52.4, Expect=8e-07]} {RNA1509_28507} {RNA1310_17556} {RNA815_8362}

Mlig455_054570 {REF} {Length: 2876} {TRANSSPLICED} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=70.1, Expect=1e-11]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [Score=53.1, Expect=6e-07]} {RNA1509_28507} {RNA1310_17556} {RNA815_8362}

Mlig455_065452 {REF} {Length: 2894} {TRANSSPLICED} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=62.0, Expect=3e-09]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [Score=53.5, Expect=4e-07]} {RNA1509_28507} {RNA1310_17556} {RNA815_8362}
12. MligTC455_28449 48 1 Mlig455_070470

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_070470 {REF} {Length: 3669} {RNA1509_35305, RNA1509_41914} {RNA1310_5827.3, RNA1509_35305} {RNA1509_35305, RNA815_5884.1}
13. MligTC455_37972 58 1.22 Mlig455_013390

Neo: -

Age: -

 SPON1 0.957 - - - - 0.957 - Mlig455_013390 {REF} {Length: 2548} {Pfam: Spondin_N [PF06468.15, score=122.9]} {Human: ENSG00000262655, SPON1, spondin 1, [Score=134, Expect=2e-33]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [Score=132, Expect=3e-33]} {Dmel: FBgn0050046, CG30046, [Score=130, Expect=2e-32]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [Score=105, Expect=3e-24]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [Score=110, Expect=3e-26]} {RNA1310_35709} {RNA815_25752}
14. MligTC455_43407 35 0.73 Mlig455_021194

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.275

 TRAF5 0.955 - - - - 0.955 - Mlig455_021194 {REF} {Length: 2878} {Pfam: TRAF-type zinc finger [PF02176.20, score=48.0]; Seven in absentia protein family [PF03145.18, score=20.5]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=200, Expect=6e-56]} {Mouse: ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=101, Expect=2e-22]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=93.2, Expect=6e-20]} {Smed: dd_Smed_v6_3837_0_1, dd_Smed_v6_3837_0_1, [Score=113, Expect=1e-26]} {RNA1509_32223} {RNA1310_24731} {RNA815_3096.1}
15. MligTC455_13572 23 0.47 Mlig455_017474

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_017474 {REF} {Length: 2992} {RNA1310_13412} {RNA815_21127}
16. MligTC455_16821 34 0.71 Mlig455_016224

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_016224 {REF} {Length: 2298} {TRANSSPLICED} {RNA1310_51660} {RNA815_58211}
17. MligTC455_55615 9 0.18 Mlig455_002937

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_002937 {REF} {Length: 373} {NoTransDecoderORF}
18. MligTC455_18343 24 0.51 Mlig455_009752, Mlig455_070106

Neo: -

Age: -

Region-enriched R4: 7.167/0.04292

 0.951 - - 0.951 - - -

Mlig455_009752 {REF} {Length: 389} {NoTransDecoderORF} {RNA1509_25325} {RNA1310_117642} {RNA815_17620.2}

Mlig455_070106 {REF} {Length: 478} {NoTransDecoderORF} {RNA1509_53541} {RNA1310_117642} {RNA815_17620.2}
19. MligTC455_12912 311 6.47 Mlig455_039330, Mlig455_064070, Mlig455_064994

Neo: -

Age: -

Regeneration-downregulated R6: -5.737

Regeneration-depleted R6: -5.737

 0.95 - - 0.950 - - -

Mlig455_039330 {REF} {Length: 175} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_118613} {RNA815_50179}

Mlig455_064070 {REF} {Length: 175} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_118613} {RNA815_50179}

Mlig455_064994 {REF} {Length: 176} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_118613} {RNA815_50179}
20. MligTC455_15219 11 0.23 Mlig455_060084

Neo: -

Age: -

 GPRC6A 0.95 - - - - 0.950 - Mlig455_060084 {REF} {Length: 2631} {Pfam: Receptor family ligand binding region [PF01094.30, score=81.5]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=67.1]; Periplasmic binding protein [PF13458.8, score=20.1]} {Human: ENSG00000173612, GPRC6A, G protein-coupled receptor class C group 6 member A, [Score=85.5, Expect=2e-16]} {Mouse: ENSMUSG00000019905, Gprc6a, G protein-coupled receptor, family C, group 6, member A, [Score=86.3, Expect=8e-17]} {Dmel: FBgn0050361, mtt, mangetout, [Score=78.2, Expect=2e-14]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_32826_0_1, dd_Smed_v6_32826_0_1, [Score=68.9, Expect=6e-12]} {RNA1310_116747}

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