TomoSeq data search

Data search

Results for MligTC455_50175

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50175

681

14.19

Mlig455_049630

Neo: -

Age: -

TEX261

Mlig455_049630 {REF} {Length: 2273} {TRANSSPLICED} {Pfam: Transmembrane adaptor Erv26 [PF04148.15, score=124.9]} {Human: ENSG00000144043, TEX261, testis expressed 261, [Score=150, Expect=3e-45]} {Mouse: ENSMUSG00000014748, Tex261, testis expressed gene 261, [Score=150, Expect=1e-45]} {Dmel: FBgn0034849, CG3500, [Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_10021_0_1, dd_Smed_v6_10021_0_1, [Score=117, Expect=1e-32]} {RNA1509_45542} {RNA1310_11823, RNA1509_45542} {RNA1509_45542, RNA815_17541.1}

Cumulative graph for MligTC455_50175

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.133	4.194	0.40362	1.00000
RegionR2	-0.127	4.194	0.78309	1.00000
RegionR3	0.266	4.194	0.45163	0.96298
RegionR4	0.601	4.194	0.15537	0.40893
RegionR5	0.348	4.194	0.27842	0.60578
RegionR6	0.023	4.194	0.94746	1.00000
RegionR7	0.407	4.194	0.38237	1.00000
RegionR8	-0.385	4.194	0.55662	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.913	4.194	0.23024	0.96044
RegenerationR2	0.617	4.194	0.06148	0.40695
RegenerationR3	-0.031	4.194	0.93328	1.00000
RegenerationR4	-0.235	4.194	0.53784	0.88763
RegenerationR5	0.358	4.194	0.27947	0.70910
RegenerationR6	0.629	4.194	0.09226	0.37794
RegenerationBL	-0.304	4.194	0.57756	0.93040
RegenerationTP	-0.113	4.194	0.83791	1.00000

Genes with expression patterns similar to MligTC455_50175

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50175	681	14.19	Mlig455_049630	Neo: - Age: -	TEX261	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049630 {REF} {Length: 2273} {TRANSSPLICED} {Pfam: Transmembrane adaptor Erv26 [PF04148.15, score=124.9]} {Human: ENSG00000144043, TEX261, testis expressed 261, [Score=150, Expect=3e-45]} {Mouse: ENSMUSG00000014748, Tex261, testis expressed gene 261, [Score=150, Expect=1e-45]} {Dmel: FBgn0034849, CG3500, [Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_10021_0_1, dd_Smed_v6_10021_0_1, [Score=117, Expect=1e-32]} {RNA1509_45542} {RNA1310_11823, RNA1509_45542} {RNA1509_45542, RNA815_17541.1}
2.	MligTC455_19778	115	2.41	Mlig455_043422	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.387 Region-enriched R4: 3.409/0.01435	ARIH2	2.539	-	-	-	0.823	0.972	0.744	Mlig455_043422 {REF} {Length: 3573} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=61.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.2]; zinc-RING finger domain [PF14634.8, score=19.9]; RING-type zinc-finger [PF13445.8, score=19.1]} {Human: ENSG00000177479, ARIH2, ariadne RBR E3 ubiquitin protein ligase 2, [Score=315, Expect=1e-102]} {Mouse: ENSMUSG00000064145, Arih2, ariadne RBR E3 ubiquitin protein ligase 2, [Score=313, Expect=2e-102]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=361, Expect=7e-121]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=303, Expect=9e-99]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [Score=317, Expect=1e-103]} {RNA1509_4785} {RNA1310_15084} {RNA815_5803}
3.	MligTC455_06785	1299	27.06	Mlig455_035683	Neo: - Age: -	ROPN1L	1.778	-	-	0.810	0.968	-	-	Mlig455_035683 {REF} {Length: 1687} {TRANSSPLICED} {Human: ENSG00000145491, ROPN1L, rhophilin associated tail protein 1 like, [RH, Score=216, Expect=8e-71]} {Mouse: ENSMUSG00000022236, Ropn1l, ropporin 1-like, [RH, Score=208, Expect=9e-68]} {Smed: dd_Smed_v6_4888_0_1, dd_Smed_v6_4888_0_1, [RH, Score=275, Expect=2e-94]} {RNA1509_2313} {RNA1310_17497.1} {RNA815_7175.1}
4.	MligTC455_54180	500	10.42	Mlig455_027741, Mlig455_027985	Neo: - Age: - Region-enriched R5: 1.276/0.04564	PIP4K2B	1.685	-	-	0.965	-	0.720	-	Mlig455_027741 {REF} {Length: 3310} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=200.4]} {Human: ENSG00000276293, PIP4K2B, phosphatidylinositol-5-phosphate 4-kinase type 2 beta, [Score=189, Expect=3e-55]; ENSG00000277292, PIP4K2B, phosphatidylinositol-5-phosphate 4-kinase type 2 beta, [Score=189, Expect=3e-55]; ENSG00000166908, PIP4K2C, phosphatidylinositol-5-phosphate 4-kinase type 2 gamma, [Score=186, Expect=5e-54]; ENSG00000150867, PIP4K2A, phosphatidylinositol-5-phosphate 4-kinase type 2 alpha, [Score=181, Expect=1e-52]} {Mouse: ENSMUSG00000018547, Pip4k2b, phosphatidylinositol-5-phosphate 4-kinase, type II, beta, [Score=187, Expect=7e-55]; ENSMUSG00000026737, Pip4k2a, phosphatidylinositol-5-phosphate 4-kinase, type II, alpha, [Score=181, Expect=9e-53]; ENSMUSG00000025417, Pip4k2c, phosphatidylinositol-5-phosphate 4-kinase, type II, gamma, [Score=179, Expect=1e-51]} {Dmel: FBgn0039924, PIP4K, Phosphatidylinositol 5-phosphate 4-kinase, [Score=190, Expect=4e-56]} {Celegans: WBGene00004088, ppk-2, PIP Kinase, [Score=191, Expect=1e-56]} {Smed: dd_Smed_v6_3905_0_1, dd_Smed_v6_3905_0_1, [Score=177, Expect=4e-51]} {RNA1509_23225, RNA1509_33161} {RNA1310_25350, RNA1509_23225, RNA1509_33161} {RNA1509_23225, RNA1509_33161, RNA815_10595} Mlig455_027985 {REF} {Length: 4357} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=202.2]} {Human: ENSG00000276293, PIP4K2B, phosphatidylinositol-5-phosphate 4-kinase type 2 beta, [Score=191, Expect=3e-56]; ENSG00000277292, PIP4K2B, phosphatidylinositol-5-phosphate 4-kinase type 2 beta, [Score=191, Expect=3e-56]; ENSG00000166908, PIP4K2C, phosphatidylinositol-5-phosphate 4-kinase type 2 gamma, [Score=188, Expect=7e-55]; ENSG00000150867, PIP4K2A, phosphatidylinositol-5-phosphate 4-kinase type 2 alpha, [Score=183, Expect=3e-53]} {Mouse: ENSMUSG00000018547, Pip4k2b, phosphatidylinositol-5-phosphate 4-kinase, type II, beta, [Score=190, Expect=7e-56]; ENSMUSG00000026737, Pip4k2a, phosphatidylinositol-5-phosphate 4-kinase, type II, alpha, [Score=183, Expect=3e-53]; ENSMUSG00000025417, Pip4k2c, phosphatidylinositol-5-phosphate 4-kinase, type II, gamma, [Score=181, Expect=3e-52]} {Dmel: FBgn0039924, PIP4K, Phosphatidylinositol 5-phosphate 4-kinase, [Score=192, Expect=7e-57]} {Celegans: WBGene00004088, ppk-2, PIP Kinase, [Score=193, Expect=1e-57]} {Smed: dd_Smed_v6_3905_0_1, dd_Smed_v6_3905_0_1, [Score=180, Expect=2e-52]} {RNA1509_23225} {RNA1310_25350} {RNA815_10595}
5.	MligTC455_20850	1618	33.71	Mlig455_021473, Mlig455_067356	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.171	MAF1	0.966	-	-	-	0.966	-	-	Mlig455_021473 {REF} {Length: 2464} {Pfam: Maf1 regulator [PF09174.12, score=163.9]} {Human: ENSG00000179632, MAF1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=148, Expect=9e-43]} {Mouse: ENSMUSG00000022553, Maf1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=145, Expect=8e-42]} {Dmel: FBgn0267861, Maf1, [RH, Score=156, Expect=1e-46]} {Celegans: WBGene00016622, mafr-1, Repressor of RNA polymerase III transcription MAF1, [RH, Score=100, Expect=4e-25]} {RNA1509_23418, RNA1509_44779} {RNA1310_20653.1, RNA1509_44779} {RNA1509_44779, RNA815_7842.1} Mlig455_067356 {REF} {Length: 2464} {Pfam: Maf1 regulator [PF09174.12, score=163.9]} {Human: ENSG00000179632, MAF1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=148, Expect=9e-43]} {Mouse: ENSMUSG00000022553, Maf1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=145, Expect=8e-42]} {Dmel: FBgn0267861, Maf1, [RH, Score=156, Expect=1e-46]} {Celegans: WBGene00016622, mafr-1, Repressor of RNA polymerase III transcription MAF1, [RH, Score=100, Expect=4e-25]} {RNA1509_13113, RNA1509_23418, RNA1509_24039} {RNA1310_20653.1, RNA1509_13113, RNA1509_23418, RNA1509_24039} {RNA1509_13113, RNA1509_23418, RNA1509_24039, RNA815_7842.1}
6.	MligTC455_36673	606	12.62	Mlig455_069379	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.401 Region-enriched R5: 1.270/0.00029		0.962	-	-	-	-	-	0.962	Mlig455_069379 {REF} {Length: 1236} {Dmel: FBgn0261284, bou, boudin, [Score=52.8, Expect=4e-10]} {Smed: dd_Smed_v6_3013_0_1, dd_Smed_v6_3013_0_1, [Score=86.3, Expect=2e-23]} {RNA1509_36130} {RNA1310_46219} {RNA815_19815.1}
7.	MligTC455_30425	212	4.42	Mlig455_033372	Neo: Irradiation Age: logFC(26M/2M)=0.355 Region-enriched R5: 3.995/0.00000 Regeneration-upregulated R6: 3.088 Regeneration-enriched R6: 3.088		0.956	-	-	-	-	0.956	-	Mlig455_033372 {REF} {Length: 3295} {Pfam: Innexin [PF00876.20, score=326.8]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=105, Expect=2e-24]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=235, Expect=2e-72]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [RH, Score=394, Expect=2e-133]} {RNA1509_44525, RNA1509_45488} {RNA1310_15441, RNA1509_45488} {RNA1509_45488, RNA815_41823}
8.	MligTC455_18605	1372	28.59	Mlig455_030381	Neo: - Age: logFC(26M/2M)=-0.360		0.954	-	-	-	0.954	-	-	Mlig455_030381 {REF} {Length: 846} {Pfam: Family of unknown function (DUF5582) [PF17819.3, score=54.5]} {Mouse: ENSMUSG00000022798, 4930435E12Rik, RIKEN cDNA 4930435E12 gene, [RH, Score=59.3, Expect=4e-11]} {RNA1509_10400, RNA1509_45977} {RNA1310_50669.1, RNA1509_10400, RNA1509_45977} {RNA1509_10400, RNA1509_45977, RNA815_25237}
9.	MligTC455_17159	2586	53.87	Mlig455_045117	Neo: Int S/G2/M Age: -	SEPT6	0.953	-	-	-	-	0.953	-	Mlig455_045117 {REF} {Length: 2099} {Pfam: Septin [PF00735.20, score=326.6]; 50S ribosome-binding GTPase [PF01926.25, score=23.6]; AAA domain [PF13401.8, score=20.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=18.9]} {Human: ENSG00000125354, SEPT6, septin 6, [RH, Score=512, Expect=0.0]; ENSG00000186522, SEPT10, septin 10, [RH, Score=500, Expect=3e-176]; ENSG00000164402, SEPT8, septin 8, [RH, Score=498, Expect=2e-175]; ENSG00000138758, SEPT11, septin 11, [RH, Score=488, Expect=2e-172]} {Mouse: ENSMUSG00000050379, Sept6, septin 6, [RH, Score=516, Expect=0.0]; ENSMUSG00000019917, Sept10, septin 10, [RH, Score=509, Expect=1e-179]; ENSMUSG00000018398, Sept8, septin 8, [RH, Score=495, Expect=7e-174]} {Dmel: FBgn0014029, Sep2, Septin 2, [RH, Score=547, Expect=0.0]} {Celegans: WBGene00006795, unc-61, [RH, Score=397, Expect=6e-135]} {Smed: dd_Smed_v6_1509_0_1, dd_Smed_v6_1509_0_1, [RH, Score=569, Expect=0.0]} {RNA1509_16022, RNA1509_5043, RNA1509_51814, RNA1509_53740, RNA1509_55107, RNA1509_59053} {RNA1310_10981.1, RNA1509_16022, RNA1509_5043, RNA1509_51814, RNA1509_53740, RNA1509_55107, RNA1509_59053} {RNA1509_16022, RNA1509_5043, RNA1509_51814, RNA1509_53740, RNA1509_55107, RNA1509_59053, RNA815_3825.1}
10.	MligTC455_04563	750	15.62	Mlig455_038799	Neo: - Age: -		0.952	-	-	0.952	-	-	-	Mlig455_038799 {REF} {Length: 2039} {RNA1509_24595, RNA1509_54341} {RNA1310_59579, RNA1509_24595} {RNA1509_24595, RNA815_27833.1}
11.	MligTC455_20403	543	11.31	Mlig455_053981, Mlig455_054056	Neo: Int S/G2/M Age: Up-Down-Down, logFC(26M/2M)=-0.260	FBXL19, FBXL2	0.951	-	-	-	0.951	-	-	Mlig455_053981 {REF} {Length: 3945} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=41.1]; F-box domain [PF00646.35, score=36.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=28.6]} {Human: ENSG00000153558, FBXL2, F-box and leucine rich repeat protein 2, [Score=87.0, Expect=3e-17]} {Mouse: ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=85.5, Expect=5e-17]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=90.1, Expect=4e-18]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_7875_0_1, dd_Smed_v6_7875_0_1, [RH, Score=208, Expect=3e-56]} {RNA1509_40983} {RNA1310_2463.1} {RNA815_13188} Mlig455_054056 {REF} {Length: 3396} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=39.4]; F-box domain [PF00646.35, score=35.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.4]} {Human: ENSG00000099364, FBXL19, F-box and leucine rich repeat protein 19, [RH, Score=76.3, Expect=1e-13]} {Mouse: ENSMUSG00000030811, Fbxl19, F-box and leucine-rich repeat protein 19, [RH, Score=76.6, Expect=7e-14]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=70.5, Expect=4e-12]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_7875_0_1, dd_Smed_v6_7875_0_1, [Score=182, Expect=2e-47]} {RNA1509_38248} {RNA1310_2463.1} {RNA815_13188}
12.	MligTC455_04564	742	15.45	Mlig455_038816	Neo: - Age: Down-Up-Down	GET4	0.95	-	-	0.950	-	-	-	Mlig455_038816 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Golgi to ER traffic protein 4 [PF04190.15, score=170.8]} {Human: ENSG00000239857, GET4, golgi to ER traffic protein 4, [RH, Score=201, Expect=5e-62]} {Mouse: ENSMUSG00000025858, Get4, golgi to ER traffic protein 4, [RH, Score=186, Expect=2e-56]} {Dmel: FBgn0086605, CG9853, [RH, Score=145, Expect=6e-41]} {Smed: dd_Smed_v6_7734_0_1, dd_Smed_v6_7734_0_1, [RH, Score=169, Expect=4e-50]} {RNA1509_32148, RNA1509_54341} {RNA1310_28338.1, RNA1509_54341} {RNA1509_54341, RNA815_12431}

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